Condition | Gene | Description | Fitness | Cons. |
| LRK54_RS01795 | hypothetical protein | -1.3 | |
| LRK54_RS01815 | DUF2147 domain-containing protein | variable | |
| LRK54_RS02100 | multidrug efflux RND transporter permease subunit | -1.4 | |
| LRK54_RS02320 | RcnB family protein | +2.7 | |
| LRK54_RS02785 | PqiC family protein | -1.4 | |
| LRK54_RS02790 | MlaD family protein | -1.4 | |
| LRK54_RS02795 | paraquat-inducible protein A | -1.5 | |
| LRK54_RS02800 | paraquat-inducible protein A | -1.4 | |
| LRK54_RS03835 | RNA polymerase sigma factor | -2.1 | |
| LRK54_RS04810 | VTT domain-containing protein | +1.5 | |
| LRK54_RS05525 | amidase | -1.4 | |
| LRK54_RS06835 | DUF2782 domain-containing protein | -1.5 | |
| LRK54_RS07105 | twin transmembrane helix small protein | variable | |
| LRK54_RS09415 | FecR family protein | -1.2 | |
| LRK54_RS09440 | FecR domain-containing protein | -1.8 | |
| LRK54_RS09460 | FecR family protein | -1.4 | |
| LRK54_RS09740 | acyltransferase | -2.7 | Yes |
| LRK54_RS09745 | hypothetical protein | -1.8 | |
| LRK54_RS09755 | 3-oxoacyl-ACP reductase | -2.6 | |
| LRK54_RS09760 | 3-oxoacyl-ACP reductase FabG | -1.4 | |
| LRK54_RS09770 | glycosyltransferase family 2 protein | -3.2 | |
| LRK54_RS09775 | beta-ketoacyl synthase chain length factor | -2.7 | |
| LRK54_RS09780 | beta-ketoacyl-[acyl-carrier-protein] synthase family protein | -2.8 | |
| LRK54_RS09840 | efflux RND transporter periplasmic adaptor subunit | -2.0 | |
| LRK54_RS10090 | glycosyltransferase family 2 protein | -1.3 | |
| LRK54_RS10110 | glycosyltransferase | -1.2 | |
| LRK54_RS10115 | O-antigen ligase family protein | -1.0 | |
| LRK54_RS10160 | AMP-binding protein | -2.5 | |
| LRK54_RS11255 | DUF2383 domain-containing protein | -1.4 | |
| LRK54_RS12740 | penicillin-binding protein 1B | -1.5 | |
| LRK54_RS12950 | DUF2066 domain-containing protein | -1.7 | |
| LRK54_RS14595 | alpha/beta hydrolase | variable | |
| LRK54_RS15290 | YXWGXW repeat-containing protein | -2.3 | |
| LRK54_RS16395 | chloride channel protein | variable | |
| LRK54_RS17165 | glycosyltransferase | -2.3 | |