Specific Phenotypes for Pseudomonas fluorescens FW300-N2E3 in pH experiments

Condition Gene Description Fitness Cons.
AO353_00585 cytochrome C oxidase Cbb3 -1.9  
AO353_00630 (Fe-S)-binding protein -1.6  
AO353_01395 peptidase S49 variable  
AO353_01690 hypothetical protein -2.7  
AO353_01905 TetR family transcriptional regulator variable  
AO353_02085 methylthioribose-1-phosphate isomerase -1.9  
AO353_03380 sugar ABC transporter ATP-binding protein -3.5  
AO353_03385 sugar ABC transporter permease -3.0  
AO353_03390 sugar ABC transporter permease -3.2  
AO353_03395 sugar ABC transporter substrate-binding protein -2.6 Yes
AO353_03500 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) variable Yes
AO353_04535 aminopeptidase -1.6  
AO353_05475 PTS fructose transporter subunit IIBC -1.5 Yes
AO353_05490 transcriptional regulator variable  
AO353_06350 hydrogenase variable Yes
AO353_07190 S-adenosylmethionine decarboxylase proenzyme variable  
AO353_07430 pyrroloquinoline quinone biosynthesis protein PqqF -1.9  
AO353_08420 ATPase P variable  
AO353_08560 spermidine/putrescine ABC transporter permease variable  
AO353_08565 spermidine/putrescine ABC transporter permease -2.4  
AO353_08570 transporter -1.7  
AO353_08575 ABC transporter substrate-binding protein variable  
AO353_08590 glutamine synthetase variable  
AO353_08735 glycine cleavage system protein T variable  
AO353_09140 XRE family transcriptional regulator -1.4  
AO353_09840 chorismate--pyruvate lyase variable Yes
AO353_11505 succinate-semialdehyde dehydrogenase (EC 1.2.1.16) (from data) variable  
AO353_13010 thiamine biosynthesis protein ThiC variable Yes
AO353_13030 cytoplasmic protein variable  
AO353_13570 TonB-dependent receptor variable Yes
AO353_14055 ATP-dependent protease -1.5  
AO353_14195 D-amino acid oxidase variable  
AO353_14415 glutamyl-Q tRNA(Asp) ligase variable  
AO353_14470 hypothetical protein -1.2  
AO353_14855 uracil phosphoribosyltransferase +2.0 Yes
AO353_16170 histidine kinase variable  
AO353_16175 cytochrome B6 variable  
AO353_16180 diguanylate cyclase variable  
AO353_16185 diguanylate cyclase +1.3  
AO353_16285 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) variable  
AO353_16290 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component (from data) variable  
AO353_16880 potassium transporter Kup variable Yes
AO353_16890 virulence factor family protein -2.7  
AO353_16895 hypothetical protein variable  
AO353_17375 beta-D-glucoside glucohydrolase variable  
AO353_19365 thiol:disulfide interchange protein variable  
AO353_20380 acyl-CoA dehydrogenase -1.7  
AO353_21450 cation:proton antiporter variable  
AO353_21460 cation:proton antiporter variable Yes
AO353_21470 cation:proton antiporter variable Yes
AO353_21675 phospholipase variable  
AO353_22655 hypothetical protein variable