Condition | Gene | Description | Fitness | Cons. |
| Pf1N1B4_1114 | ABC transporter, ATP-binding protein | variable | |
| Pf1N1B4_1144 | PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) | -1.4 | Yes |
| Pf1N1B4_1183 | Sodium-dependent transporter family protein | variable | |
| Pf1N1B4_1306 | Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) | +1.2 | |
| Pf1N1B4_1337 | Outer membrane receptor proteins, mostly Fe transport | +1.9 | Yes |
| Pf1N1B4_1447 | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | -2.4 | Yes |
| Pf1N1B4_1586 | Purine-cytosine permease | variable | |
| Pf1N1B4_1733 | 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | -2.1 | |
| Pf1N1B4_1887 | probable exported protein YPO0432 | +1.4 | |
| Pf1N1B4_2143 | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | -1.9 | |
| Pf1N1B4_2331 | Thiazole biosynthesis protein ThiG | -2.4 | |
| Pf1N1B4_2504 | 5-aminopentanamidase (EC 3.5.1.30) (from data) | -1.0 | |
| Pf1N1B4_2637 | dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) | +1.9 | |
| Pf1N1B4_2687 | DNA-3-methyladenine glycosylase II (EC 3.2.2.21) | -1.2 | |
| Pf1N1B4_2714 | FOG: TPR repeat, SEL1 subfamily | +1.4 | |
| Pf1N1B4_2718 | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | variable | Yes |
| Pf1N1B4_2934 | Uracil phosphoribosyltransferase (EC 2.4.2.9) | +1.4 | Yes |
| Pf1N1B4_2947 | Restriction endonuclease | +1.8 | |
| Pf1N1B4_2957 | Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) | -1.3 | |
| Pf1N1B4_3322 | L-aspartate oxidase (EC 1.4.3.16) | variable | |
| Pf1N1B4_3431 | ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) | +1.1 | |
| Pf1N1B4_3432 | ABC transporter for L-Arginine and L-Citrulline, permease component 1 (from data) | +1.3 | |
| Pf1N1B4_3433 | ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data) | +1.3 | |
| Pf1N1B4_3437 | Arginine pathway regulatory protein ArgR, repressor of arg regulon | +1.6 | |
| Pf1N1B4_3440 | Succinylornithine transaminase (EC 2.6.1.81) (from data) | +1.7 | |
| Pf1N1B4_3482 | outer membrane protein H1 | +1.3 | |
| Pf1N1B4_3496 | Cytochrome c-type biogenesis protein ResA | +1.3 | |
| Pf1N1B4_366 | FIG00954136: hypothetical protein | variable | |
| Pf1N1B4_3696 | FIG00955360: hypothetical protein | -3.7 | |
| Pf1N1B4_3996 | Histone acetyltransferase HPA2 and related acetyltransferases | variable | |
| Pf1N1B4_4858 | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | +1.6 | |
| Pf1N1B4_5045 | Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone | +1.4 | |
| Pf1N1B4_5636 | Histidine kinase/response regulator hybrid protein | +1.3 | |
| Pf1N1B4_5822 | Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B | variable | Yes |
| Pf1N1B4_5824 | Na(+) H(+) antiporter subunit D | -3.4 | Yes |
| Pf1N1B4_596 | Glucose ABC transport system, periplasmic sugar-binding protein | -4.0 | Yes |
| Pf1N1B4_621 | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | -2.5 | Yes |
| Pf1N1B4_630 | TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain | -4.5 | |
| Pf1N1B4_654 | Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) / Thiamin-phosphate pyrophosphorylase-like protein | variable | |