Specific Phenotypes for Pseudomonas fluorescens SBW25-INTG in pH experiments

Condition Gene Description Fitness Cons.
D-Glucose PFLU_RS01795 glycine betaine/L-proline ABC transporter ATP-binding protein variable  
D-Glucose PFLU_RS02340 TonB-dependent receptor variable  
D-Glucose PFLU_RS04010 phosphoenolpyruvate--protein phosphotransferase variable  
D-Glucose PFLU_RS04020 PTS fructose-like transporter subunit IIB variable  
D-Glucose PFLU_RS05605 HAMP domain-containing protein -1.7  
D-Glucose PFLU_RS06865 1-acyl-sn-glycerol-3-phosphate acyltransferase -1.3  
D-Glucose PFLU_RS06870 GNAT family N-acetyltransferase variable  
D-Glucose PFLU_RS07560 allophanate hydrolase subunit 1 variable  
D-Glucose PFLU_RS07850 hypothetical protein variable  
D-Glucose PFLU_RS08285 hypothetical protein variable  
D-Glucose PFLU_RS08905 hypothetical protein variable  
D-Glucose PFLU_RS11960 LysR family transcriptional regulator variable  
D-Glucose PFLU_RS13135 decarboxylating 6-phosphogluconate dehydrogenase variable  
D-Glucose PFLU_RS13240 D-glycerate dehydrogenase variable  
D-Glucose PFLU_RS14800 UDP-glucose/GDP-mannose dehydrogenase family protein -1.7  
D-Glucose PFLU_RS15730 ABC transporter ATP-binding protein/permease variable  
D-Glucose PFLU_RS18915 translocation/assembly module TamB -1.5  
D-Glucose PFLU_RS20545 tRNA pseudouridine(38-40) synthase TruA variable  
D-Glucose PFLU_RS20695 M4 family metallopeptidase +1.7  
D-Glucose PFLU_RS20700 DNA/RNA non-specific endonuclease +1.4  
D-Glucose PFLU_RS22325 cytochrome-c oxidase, cbb3-type subunit II variable  
D-Glucose PFLU_RS27555 FAD-dependent oxidoreductase -1.1  
D-Glucose PFLU_RS29195 heme biosynthesis protein HemY -1.5  
D-Glucose PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB variable Yes
D-Glucose PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR variable  
D-Glucose PFLU_RS29915 cation:proton antiporter variable  
D-Glucose PFLU_RS30335 AlpA family phage regulatory protein variable  
D-Glucose PFLU_RS31405 hypothetical protein +1.7  
Trisodium citrate dihydrate PFLU_RS00505 TerC family protein variable  
Trisodium citrate dihydrate PFLU_RS00510 CitMHS family transporter -3.5 Yes
Trisodium citrate dihydrate PFLU_RS00955 sulfate ABC transporter permease subunit CysW variable  
Trisodium citrate dihydrate PFLU_RS02835 Hsp70 family protein variable  
Trisodium citrate dihydrate PFLU_RS03025 tRNA dihydrouridine synthase DusB variable  
Trisodium citrate dihydrate PFLU_RS04155 alpha/beta fold hydrolase +1.6  
Trisodium citrate dihydrate PFLU_RS04175 acyl-CoA dehydrogenase +1.5  
Trisodium citrate dihydrate PFLU_RS05160 TonB-dependent receptor family protein variable  
Trisodium citrate dihydrate PFLU_RS05295 carboxy-S-adenosyl-L-methionine synthase CmoA variable  
Trisodium citrate dihydrate PFLU_RS05475 amino acid permease +1.2  
Trisodium citrate dihydrate PFLU_RS05540 LysR family transcriptional regulator -2.2  
Trisodium citrate dihydrate PFLU_RS05665 aquaporin +1.4  
Trisodium citrate dihydrate PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein -4.0 Yes
Trisodium citrate dihydrate PFLU_RS07155 OprD family porin +2.0 Yes
Trisodium citrate dihydrate PFLU_RS07160 response regulator -4.0 Yes
Trisodium citrate dihydrate PFLU_RS07165 sensor histidine kinase -4.2 Yes
Trisodium citrate dihydrate PFLU_RS09200 transglutaminase family protein variable  
Trisodium citrate dihydrate PFLU_RS12910 hydroxyacylglutathione hydrolase variable  
Trisodium citrate dihydrate PFLU_RS14800 UDP-glucose/GDP-mannose dehydrogenase family protein -1.6  
Trisodium citrate dihydrate PFLU_RS14825 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA -1.7  
Trisodium citrate dihydrate PFLU_RS18920 outer membrane protein assembly factor -1.4  
Trisodium citrate dihydrate PFLU_RS20455 DUF979 domain-containing protein variable  
Trisodium citrate dihydrate PFLU_RS21335 DUF1446 domain-containing protein +1.0  
Trisodium citrate dihydrate PFLU_RS22385 oxygen-independent coproporphyrinogen III oxidase +1.9  
Trisodium citrate dihydrate PFLU_RS22705 inactive transglutaminase family protein -1.4  
Trisodium citrate dihydrate PFLU_RS24170 Nudix family hydrolase variable  
Trisodium citrate dihydrate PFLU_RS25660 tetratricopeptide repeat protein variable  
Trisodium citrate dihydrate PFLU_RS26175 NADP-specific glutamate dehydrogenase variable  
Trisodium citrate dihydrate PFLU_RS26740 sigma-54-dependent Fis family transcriptional regulator variable  
Trisodium citrate dihydrate PFLU_RS27385 phosphoglycolate phosphatase variable  
Trisodium citrate dihydrate PFLU_RS27605 acyl-CoA dehydrogenase -1.7  
Trisodium citrate dihydrate PFLU_RS28955 TIGR02449 family protein -1.5  
Trisodium citrate dihydrate PFLU_RS29385 AsnC family transcriptional regulator +1.4  
Trisodium citrate dihydrate PFLU_RS29725 phosphate regulon transcriptional regulatory protein PhoB -2.9  
Trisodium citrate dihydrate PFLU_RS29730 phosphate regulon sensor histidine kinase PhoR variable  
Trisodium citrate dihydrate PFLU_RS30335 AlpA family phage regulatory protein variable  
Trisodium citrate dihydrate PFLU_RS30635 hypothetical protein variable  
Trisodium citrate dihydrate PFLU_RS31400 hypothetical protein -2.5