Specific Phenotypes for Sphingomonas koreensis DSMZ 15582 in nutrient experiments

Condition Gene Description Fitness Cons.
D-Cellobiose Ga0059261_0033 transcriptional regulator, AsnC family variable  
D-Cellobiose Ga0059261_0034 Putative threonine efflux protein variable  
D-Cellobiose Ga0059261_0060 Uncharacterized conserved protein variable  
D-Cellobiose Ga0059261_0257 hypothetical protein +1.8  
D-Cellobiose Ga0059261_0282 ribosomal protein S12 methylthiotransferase RimO +1.1  
D-Cellobiose Ga0059261_0837 3-hydroxyacyl-CoA dehydrogenase -1.0  
D-Cellobiose Ga0059261_0917 Predicted P-loop-containing kinase -2.4  
D-Cellobiose Ga0059261_1166 Beta-glucosidase (EC 3.2.1.21) (from data) -4.7  
D-Cellobiose Ga0059261_1414 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF +1.5  
D-Cellobiose Ga0059261_1453 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs -1.7  
D-Cellobiose Ga0059261_1458 Cystathionine beta-lyases/cystathionine gamma-synthases variable  
D-Cellobiose Ga0059261_1505 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) +1.2  
D-Cellobiose Ga0059261_1610 CBS domain/Transporter associated domain +1.6  
D-Cellobiose Ga0059261_1759 Phosphoadenosine phosphosulfate reductase family +1.2  
D-Cellobiose Ga0059261_1932 Peptidase family M23 -1.7  
D-Cellobiose Ga0059261_2014 Predicted permease -1.8  
D-Cellobiose Ga0059261_2044 peptide chain release factor 3 +1.2  
D-Cellobiose Ga0059261_2170 Thioredoxin domain-containing protein -1.2  
D-Cellobiose Ga0059261_2204 tRNA modification GTPase trmE -1.4  
D-Cellobiose Ga0059261_2222 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family variable  
D-Cellobiose Ga0059261_2466 DnaJ domain/DnaJ C terminal domain -1.1  
D-Cellobiose Ga0059261_2512 Uncharacterized protein conserved in bacteria -1.4  
D-Cellobiose Ga0059261_2662 Transcriptional regulators -1.1  
D-Cellobiose Ga0059261_2695 Methyltransferase domain +1.9  
D-Cellobiose Ga0059261_3094 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase/FKBP-type peptidyl-prolyl cis-trans isomerase +1.3  
D-Cellobiose Ga0059261_3099 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) -1.2  
D-Cellobiose Ga0059261_3163 hypothetical protein +1.7  
D-Cellobiose Ga0059261_3182 Opacity protein and related surface antigens -1.4  
D-Cellobiose Ga0059261_3207 Disulfide bond chaperones of the HSP33 family +1.5  
D-Cellobiose Ga0059261_3265 Glycerol-3-phosphate dehydrogenase +1.1  
D-Cellobiose Ga0059261_3403 Uncharacterized protein conserved in bacteria +1.8  
D-Cellobiose Ga0059261_3472 Sporulation related domain -1.6  
D-Cellobiose Ga0059261_3491 hypothetical protein +1.6  
D-Cellobiose Ga0059261_3526 hemimethylated DNA binding domain +1.2  
D-Cellobiose Ga0059261_3642 Predicted membrane protein -1.1  
D-Cellobiose Ga0059261_3770 Beta-lactamase class A -1.6  
D-Cellobiose Ga0059261_3807 Uncharacterized conserved protein +2.0  
D-Cellobiose Ga0059261_3876 Signal transduction histidine kinase -1.4  
D-Cellobiose Ga0059261_3878 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain -1.7  
D-Cellobiose Ga0059261_3880 Glycosyltransferase -1.7  
D-Cellobiose Ga0059261_3881 Osmosensitive K+ channel histidine kinase +1.4  
D-Cellobiose Ga0059261_3889 Beta-glucosidase-related glycosidases -1.5  
D-Cellobiose Ga0059261_3899 Alanine dehydrogenase (EC 1.4.1.1) (from data) variable  
D-Cellobiose Ga0059261_3900 Transcriptional regulators variable  
D-Cellobiose Ga0059261_3930 Putative protein-S-isoprenylcysteine methyltransferase -1.4  
D-Cellobiose Ga0059261_3949 type II secretion system protein G -1.3  
D-Cellobiose Ga0059261_3950 Type II secretion system (T2SS), protein L -1.3  
D-Cellobiose Ga0059261_3952 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB -1.3  
D-Cellobiose Ga0059261_3953 Type II secretory pathway, component PulF -1.2  
D-Cellobiose Ga0059261_3968 Uncharacterized protein conserved in bacteria -1.6  
D-Cellobiose Ga0059261_4049 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs -2.0  
D-Glucose Ga0059261_0033 transcriptional regulator, AsnC family variable  
D-Glucose Ga0059261_0034 Putative threonine efflux protein variable  
D-Glucose Ga0059261_0039 His Kinase A (phospho-acceptor) domain +2.1  
D-Glucose Ga0059261_0060 Uncharacterized conserved protein +1.5  
D-Glucose Ga0059261_0232 patatin-related protein +1.0  
D-Glucose Ga0059261_0257 hypothetical protein +1.5  
D-Glucose Ga0059261_0282 ribosomal protein S12 methylthiotransferase RimO +1.1  
D-Glucose Ga0059261_0729 MOSC domain variable  
D-Glucose Ga0059261_0837 3-hydroxyacyl-CoA dehydrogenase -1.1  
D-Glucose Ga0059261_0848 transcriptional regulator, TetR family variable  
D-Glucose Ga0059261_1043 Uncharacterized protein conserved in bacteria variable  
D-Glucose Ga0059261_1453 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs -1.6  
D-Glucose Ga0059261_1458 Cystathionine beta-lyases/cystathionine gamma-synthases variable  
D-Glucose Ga0059261_1464 Aspartyl/Asparaginyl beta-hydroxylase +1.4  
D-Glucose Ga0059261_1467 Long-chain acyl-CoA synthetases (AMP-forming) -1.6  
D-Glucose Ga0059261_1571 SapC +1.6  
D-Glucose Ga0059261_1932 Peptidase family M23 -1.9  
D-Glucose Ga0059261_2025 Predicted aminopeptidases -1.3  
D-Glucose Ga0059261_2044 peptide chain release factor 3 +1.7  
D-Glucose Ga0059261_2170 Thioredoxin domain-containing protein -1.4  
D-Glucose Ga0059261_2204 tRNA modification GTPase trmE variable  
D-Glucose Ga0059261_2466 DnaJ domain/DnaJ C terminal domain variable  
D-Glucose Ga0059261_2570 Type IV secretory pathway, TrbD component variable  
D-Glucose Ga0059261_2682 Response regulator receiver domain +1.3  
D-Glucose Ga0059261_2695 Methyltransferase domain +2.2  
D-Glucose Ga0059261_2739 heat-inducible transcription repressor HrcA variable  
D-Glucose Ga0059261_2765 Cu/Zn superoxide dismutase +1.7  
D-Glucose Ga0059261_3094 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase/FKBP-type peptidyl-prolyl cis-trans isomerase variable  
D-Glucose Ga0059261_3163 hypothetical protein +1.5  
D-Glucose Ga0059261_3207 Disulfide bond chaperones of the HSP33 family +2.1  
D-Glucose Ga0059261_3237 hypothetical protein +1.3  
D-Glucose Ga0059261_3390 methionine aminopeptidase, type I -1.4  
D-Glucose Ga0059261_3403 Uncharacterized protein conserved in bacteria variable  
D-Glucose Ga0059261_3473 deoxyguanosinetriphosphate triphosphohydrolase, putative variable  
D-Glucose Ga0059261_3491 hypothetical protein variable  
D-Glucose Ga0059261_3526 hemimethylated DNA binding domain +1.3  
D-Glucose Ga0059261_3770 Beta-lactamase class A -1.7  
D-Glucose Ga0059261_3807 Uncharacterized conserved protein variable  
D-Glucose Ga0059261_3876 Signal transduction histidine kinase -1.2  
D-Glucose Ga0059261_3880 Glycosyltransferase -1.7  
D-Glucose Ga0059261_3899 Alanine dehydrogenase (EC 1.4.1.1) (from data) variable  
D-Glucose Ga0059261_3900 Transcriptional regulators variable  
D-Glucose Ga0059261_3930 Putative protein-S-isoprenylcysteine methyltransferase variable  
D-Glucose Ga0059261_3950 Type II secretion system (T2SS), protein L -1.2  
D-Glucose Ga0059261_3956 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) -1.3  
D-Glucose Ga0059261_4049 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs variable  
D-Glucose Ga0059261_4212 TPR repeat +1.3  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_0324 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit -3.8  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_0325 2-oxoacid:acceptor oxidoreductase, alpha subunit -4.2  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_0692 Predicted secreted protein -1.9  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_0765 FecR family protein +1.9  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_1504 Uncharacterized protein conserved in bacteria +1.2  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_1876 Predicted membrane protein -1.1  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_2000 Uncharacterized conserved protein -1.4  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_2626 transcriptional regulator, DeoR family variable  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_3536 hypothetical protein -2.6  
L-Glutamic acid monopotassium salt monohydrate Ga0059261_3625 Short-chain dehydrogenases of various substrate specificities -2.2