| Condition | Gene | Description | Fitness | Cons. |
|---|
| Ammonium chloride | Pf6N2E2_1672 | hypothetical protein | variable | |
| Ammonium chloride | Pf6N2E2_1678 | Major facilitator family transporter | +1.4 | |
| Ammonium chloride | Pf6N2E2_1717 | Anthranilate synthase, aminase component (EC 4.1.3.27) | -3.2 | |
| Ammonium chloride | Pf6N2E2_2308 | Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) | variable | |
| Ammonium chloride | Pf6N2E2_4658 | FIG00955006: hypothetical protein | -1.8 | |
| Ammonium chloride | Pf6N2E2_5759 | DNA recombination protein RmuC | -1.5 | |
| Ammonium chloride | Pf6N2E2_5872 | Sensor histidine kinase/response regulator | +1.4 | |
| Ammonium chloride | Pf6N2E2_762 | FIG00960186: hypothetical protein | variable | |
| Cytidine | Pf6N2E2_1072 | LmbE-like protein | -1.3 | |
| Cytidine | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -3.3 | |
| Cytidine | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -2.6 | |
| Cytidine | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -2.0 | |
| Cytidine | Pf6N2E2_148 | Membrane fusion component of tripartite multidrug resistance system | -1.4 | |
| Cytidine | Pf6N2E2_149 | Inner membrane component of tripartite multidrug resistance system | -1.4 | |
| Cytidine | Pf6N2E2_1678 | Major facilitator family transporter | +1.7 | |
| Cytidine | Pf6N2E2_2470 | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | -1.8 | |
| Cytidine | Pf6N2E2_2530 | Sensory box/GGDEF family protein | -2.6 | |
| Cytidine | Pf6N2E2_2587 | Serine phosphatase RsbU, regulator of sigma subunit | +1.9 | |
| Cytidine | Pf6N2E2_2732 | Transcriptional regulator, LysR family | -1.6 | |
| Cytidine | Pf6N2E2_2888 | Glucose-selective porin OprB | -1.6 | |
| Cytidine | Pf6N2E2_34 | Cytosine deaminase (EC 3.5.4.1) | -3.5 | Yes |
| Cytidine | Pf6N2E2_3456 | Inner membrane protein YfiN | +1.3 | |
| Cytidine | Pf6N2E2_3463 | Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) | -1.6 | Yes |
| Cytidine | Pf6N2E2_3464 | LysR family transcriptional regulator PA0133 | -1.0 | |
| Cytidine | Pf6N2E2_3983 | Membrane bound c-di-GMP receptor LapD | +1.4 | |
| Cytidine | Pf6N2E2_4028 | Biofilm PGA synthesis auxiliary protein PgaD | +1.4 | |
| Cytidine | Pf6N2E2_4029 | Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) | +1.6 | |
| Cytidine | Pf6N2E2_4030 | Biofilm PGA synthesis deacetylase PgaB (EC 3.-) | +1.4 | |
| Cytidine | Pf6N2E2_4031 | Biofilm PGA outer membrane secretin PgaA | +1.5 | |
| Cytidine | Pf6N2E2_4193 | Signal transduction histidine kinase | +1.4 | |
| Cytidine | Pf6N2E2_4194 | Two-component response regulator | +1.3 | |
| Cytidine | Pf6N2E2_4790 | sensory box/GGDEF domain/EAL domain protein | -1.1 | |
| Cytidine | Pf6N2E2_5031 | hypothetical protein | -1.2 | |
| Cytidine | Pf6N2E2_5083 | Serine hydroxymethyltransferase (EC 2.1.2.1) | -1.0 | |
| Cytidine | Pf6N2E2_5277 | FIG00953110: hypothetical protein | -1.6 | |
| Cytidine | Pf6N2E2_5491 | FOG: GGDEF domain | +1.4 | |
| Cytosine | Pf6N2E2_1072 | LmbE-like protein | -2.0 | |
| Cytosine | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -3.6 | |
| Cytosine | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -3.3 | |
| Cytosine | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -2.3 | |
| Cytosine | Pf6N2E2_1672 | hypothetical protein | -3.2 | |
| Cytosine | Pf6N2E2_2057 | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes | +1.1 | |
| Cytosine | Pf6N2E2_2530 | Sensory box/GGDEF family protein | -1.3 | |
| Cytosine | Pf6N2E2_2888 | Glucose-selective porin OprB | -1.9 | |
| Cytosine | Pf6N2E2_34 | Cytosine deaminase (EC 3.5.4.1) | -3.0 | Yes |
| Cytosine | Pf6N2E2_3463 | Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) | -3.2 | Yes |
| Cytosine | Pf6N2E2_3464 | LysR family transcriptional regulator PA0133 | -3.1 | |
| Cytosine | Pf6N2E2_3467 | ABC transporter ATP-binding protein | -1.3 | Yes |
| Cytosine | Pf6N2E2_3468 | Nucleoside ABC transporter, permease protein 1 | -1.3 | Yes |
| Cytosine | Pf6N2E2_3469 | Nucleoside ABC transporter, permease protein 2 | -1.4 | Yes |
| Cytosine | Pf6N2E2_3476 | Nucleoside ABC transporter, periplasmic nucleoside-binding protein | -1.4 | Yes |
| Cytosine | Pf6N2E2_3871 | FIG00553872: hypothetical protein | +1.5 | |
| Cytosine | Pf6N2E2_496 | Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) | -1.8 | Yes |
| Cytosine | Pf6N2E2_497 | Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism | -2.0 | Yes |
| Cytosine | Pf6N2E2_498 | Dihydropyrimidinase (EC 3.5.2.2) (from data) | -1.9 | Yes |
| Cytosine | Pf6N2E2_499 | Possible pyrimidine permease in reductive pathway | -1.5 | Yes |
| D-Alanine | Pf6N2E2_4390 | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | -3.8 | Yes |
| Glucuronamide | Pf6N2E2_1067 | Glyceraldehyde-3-phosphate dehydrogenase, putative | -1.5 | |
| Glucuronamide | Pf6N2E2_3456 | Inner membrane protein YfiN | +1.1 | |
| Glucuronamide | Pf6N2E2_3983 | Membrane bound c-di-GMP receptor LapD | +1.6 | |
| Glucuronamide | Pf6N2E2_4412 | Ammonium transporter | -1.6 | Yes |
| Gly-Glu | Pf6N2E2_147 | Outer membrane component of tripartite multidrug resistance system | -1.3 | |
| Gly-Glu | Pf6N2E2_148 | Membrane fusion component of tripartite multidrug resistance system | -2.1 | |
| Gly-Glu | Pf6N2E2_149 | Inner membrane component of tripartite multidrug resistance system | -1.8 | |
| Gly-Glu | Pf6N2E2_163 | Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) | +1.8 | Yes |
| Gly-Glu | Pf6N2E2_164 | Ribose operon repressor | +2.1 | Yes |
| Gly-Glu | Pf6N2E2_165 | Ribokinase (EC 2.7.1.15) | +3.2 | Yes |
| Gly-Glu | Pf6N2E2_2120 | Alpha-amylase (EC 3.2.1.1) | -2.0 | Yes |
| Gly-Glu | Pf6N2E2_2194 | 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) | +3.1 | |
| Gly-Glu | Pf6N2E2_2455 | FIG00953957: hypothetical protein | +2.3 | |
| Gly-Glu | Pf6N2E2_2456 | Transcriptional regulator, LysR family | +2.4 | |
| Gly-Glu | Pf6N2E2_2888 | Glucose-selective porin OprB | -2.0 | |
| Gly-Glu | Pf6N2E2_2958 | ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) | -1.3 | |
| Gly-Glu | Pf6N2E2_2959 | ABC transporter for L-Lysine, permease component 1 (from data) | -1.4 | |
| Gly-Glu | Pf6N2E2_2960 | ABC transporter for L-Lysine, permease component 2 (from data) | -1.5 | |
| Gly-Glu | Pf6N2E2_3114 | Transcriptional regulator, TetR family | +2.3 | Yes |
| Gly-Glu | Pf6N2E2_3306 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | +2.2 | Yes |
| Gly-Glu | Pf6N2E2_3307 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | -3.8 | Yes |
| Gly-Glu | Pf6N2E2_3311 | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | -4.1 | Yes |
| Gly-Glu | Pf6N2E2_3312 | Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) | -4.4 | Yes |
| Gly-Glu | Pf6N2E2_3314 | Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) | -3.8 | Yes |
| Gly-Glu | Pf6N2E2_3586 | NAD synthetase (EC 6.3.1.5) | -2.0 | |
| Gly-Glu | Pf6N2E2_3871 | FIG00553872: hypothetical protein | -1.8 | |
| Gly-Glu | Pf6N2E2_4496 | Acetylornithine deacetylase (EC 3.5.1.16) | +1.6 | Yes |
| Gly-Glu | Pf6N2E2_4813 | Probable two-component sensor, near polyamine transporter | -1.5 | |
| Gly-Glu | Pf6N2E2_5558 | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | -3.7 | Yes |
| Glycine | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -3.0 | |
| Glycine | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -2.3 | |
| Glycine | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -1.8 | |
| Glycine | Pf6N2E2_2048 | Transcriptional regulator, IclR family | -1.4 | |
| Glycine | Pf6N2E2_3592 | Protein containing transglutaminase-like domain, putative cysteine protease | -1.3 | |
| Glycine | Pf6N2E2_3593 | Protein containing domains DUF404, DUF407, DUF403 | -1.8 | |
| Glycine | Pf6N2E2_3619 | NAD(P)HX epimerase / NAD(P)HX dehydratase | -1.5 | |
| Glycine | Pf6N2E2_3620 | Epoxyqueuosine (oQ) reductase QueG | -2.1 | |
| Glycine | Pf6N2E2_3621 | putative transporter, required for glycine utilization (from data) | -4.9 | Yes |
| Glycine | Pf6N2E2_4412 | Ammonium transporter | -4.2 | Yes |
| Glycine | Pf6N2E2_4686 | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | -1.1 | |
| Glycine | Pf6N2E2_4702 | DgcA Dimethylglycine demethylase subunit A | +1.4 | |
| Glycine | Pf6N2E2_4704 | Dimethylglycine dehydrogenase (ferredoxin), FeS subunit DgcB (EC 1.5.7.-) (from data) | +1.1 | |
| Glycine | Pf6N2E2_5556 | Aminomethyltransferase (EC 2.1.2.10) (from data) | -6.0 | Yes |
| Glycine | Pf6N2E2_5557 | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | -3.2 | Yes |
| Glycine | Pf6N2E2_5558 | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | -5.0 | Yes |
| Glycine | Pf6N2E2_5559 | Glycine cleavage system H protein | -3.9 | Yes |
| Glycine | Pf6N2E2_5881 | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit | +1.1 | |
| Glycine | Pf6N2E2_5945 | Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C | -3.4 | |
| L-Alanine | Pf6N2E2_1717 | Anthranilate synthase, aminase component (EC 4.1.3.27) | -2.5 | |
| L-Alanine | Pf6N2E2_2248 | Aspartate racemase | -1.3 | |
| L-Alanine | Pf6N2E2_4390 | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | -4.9 | Yes |
| L-Arginine | Pf6N2E2_4509 | Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) | -1.9 | Yes |
| L-Arginine | Pf6N2E2_5442 | Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) | -1.2 | |
| L-Arginine | Pf6N2E2_5660 | L-Arginine ABC transporter, periplasmic substrate-binding component (from data) | -3.4 | Yes |
| L-Arginine | Pf6N2E2_5661 | L-Arginine ABC transporter, permease protein AotQ (from data) | -3.9 | Yes |
| L-Arginine | Pf6N2E2_5662 | L-Arginine ABC transporter, permease protein AotM (from data) | -2.3 | Yes |
| L-Arginine | Pf6N2E2_614 | 3-carboxymuconate cyclase | -1.3 | |
| L-Asparagine | Pf6N2E2_1717 | Anthranilate synthase, aminase component (EC 4.1.3.27) | -1.9 | |
| L-Asparagine | Pf6N2E2_4086 | sodium/alanine transporter | -1.7 | Yes |
| L-Asparagine | Pf6N2E2_4087 | L-asparaginase (EC 3.5.1.1) (from data) | -3.8 | Yes |
| L-Asparagine | Pf6N2E2_5564 | Membrane protein glpM | -2.5 | |
| L-Aspartic Acid | Pf6N2E2_2248 | Aspartate racemase | -4.7 | |
| L-Aspartic Acid | Pf6N2E2_3073 | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | -1.5 | |
| L-Aspartic Acid | Pf6N2E2_4754 | Protein rarD | -1.3 | |
| L-Citrulline | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -2.8 | |
| L-Citrulline | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -1.7 | |
| L-Citrulline | Pf6N2E2_1672 | hypothetical protein | -2.3 | |
| L-Citrulline | Pf6N2E2_2530 | Sensory box/GGDEF family protein | -1.4 | |
| L-Citrulline | Pf6N2E2_4412 | Ammonium transporter | -1.4 | |
| L-Citrulline | Pf6N2E2_4658 | FIG00955006: hypothetical protein | -2.6 | |
| L-Glutamine | Pf6N2E2_1717 | Anthranilate synthase, aminase component (EC 4.1.3.27) | -2.5 | |
| L-Glutamine | Pf6N2E2_5471 | Transcriptional activator MetR | -1.2 | Yes |
| L-Histidine | Pf6N2E2_1717 | Anthranilate synthase, aminase component (EC 4.1.3.27) | -1.7 | |
| L-Histidine | Pf6N2E2_3797 | N-formylglutamate deformylase (EC 3.5.1.68) (from data) | -3.1 | Yes |
| L-Histidine | Pf6N2E2_3798 | Imidazolonepropionase (EC 3.5.2.7) (from data) | -3.7 | Yes |
| L-Histidine | Pf6N2E2_3799 | Histidine ammonia-lyase (EC 4.3.1.3) (from data) | -5.5 | Yes |
| L-Histidine | Pf6N2E2_3800 | Histidine ammonia-lyase (EC 4.3.1.3) | -3.0 | |
| L-Histidine | Pf6N2E2_3801 | Histidine ABC transporter, ATP-binding protein (TC 3.A.1) | -4.7 | |
| L-Histidine | Pf6N2E2_3803 | Histidine ABC transporter, histidine-binding protein (TC 3.A.1) | -3.1 | |
| L-Histidine | Pf6N2E2_3804 | Cytosine/purine/uracil/thiamine/allantoin permease family protein | -3.7 | Yes |
| L-Histidine | Pf6N2E2_3805 | Urocanate hydratase (EC 4.2.1.49) (from data) | -3.7 | Yes |
| L-Histidine | Pf6N2E2_3808 | Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data) | -3.8 | Yes |
| L-Histidine | Pf6N2E2_5402 | ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) | -1.9 | Yes |
| L-Histidine | Pf6N2E2_5403 | ABC transporter for D-Alanine, permease component 2 (from data) | -2.0 | Yes |
| L-Histidine | Pf6N2E2_5404 | ABC transporter for D-Alanine, permease component 1 (from data) | -1.7 | Yes |
| L-Histidine | Pf6N2E2_5405 | ABC transporter for D-Alanine, ATPase component (from data) | -2.1 | Yes |
| L-Histidine | Pf6N2E2_614 | 3-carboxymuconate cyclase | -1.1 | |
| L-Isoleucine | Pf6N2E2_1138 | Transcriptional regulator, AraC family | -1.8 | Yes |
| L-Isoleucine | Pf6N2E2_1146 | 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) | -1.7 | Yes |
| L-Isoleucine | Pf6N2E2_147 | Outer membrane component of tripartite multidrug resistance system | -1.3 | |
| L-Isoleucine | Pf6N2E2_148 | Membrane fusion component of tripartite multidrug resistance system | -1.5 | |
| L-Isoleucine | Pf6N2E2_149 | Inner membrane component of tripartite multidrug resistance system | -1.7 | |
| L-Isoleucine | Pf6N2E2_2248 | Aspartate racemase | -1.1 | |
| L-Isoleucine | Pf6N2E2_2530 | Sensory box/GGDEF family protein | -1.6 | |
| L-Isoleucine | Pf6N2E2_2887 | Aldose 1-epimerase | -2.3 | |
| L-Isoleucine | Pf6N2E2_2921 | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | +1.7 | |
| L-Isoleucine | Pf6N2E2_2923 | ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) | +1.5 | Yes |
| L-Isoleucine | Pf6N2E2_2924 | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) | +1.5 | Yes |
| L-Isoleucine | Pf6N2E2_2925 | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) | +1.5 | Yes |
| L-Isoleucine | Pf6N2E2_2926 | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data) | +1.6 | Yes |
| L-Isoleucine | Pf6N2E2_3586 | NAD synthetase (EC 6.3.1.5) | -2.6 | |
| L-Isoleucine | Pf6N2E2_4388 | Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) | -1.5 | |
| L-Isoleucine | Pf6N2E2_4413 | FIG004064: hypothetical protein | -1.6 | |
| L-Isoleucine | Pf6N2E2_480 | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) | -1.7 | Yes |
| L-Isoleucine | Pf6N2E2_481 | branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) | -2.4 | Yes |
| L-Isoleucine | Pf6N2E2_5025 | Sensor histidine kinase | +1.3 | |
| L-Isoleucine | Pf6N2E2_5045 | Permease of the drug/metabolite transporter (DMT) superfamily | -2.1 | |
| L-Isoleucine | Pf6N2E2_5275 | putative membrane protein | -4.4 | Yes |
| L-Isoleucine | Pf6N2E2_5403 | ABC transporter for D-Alanine, permease component 2 (from data) | +1.6 | Yes |
| L-Isoleucine | Pf6N2E2_5404 | ABC transporter for D-Alanine, permease component 1 (from data) | +1.4 | Yes |
| L-Isoleucine | Pf6N2E2_5405 | ABC transporter for D-Alanine, ATPase component (from data) | +1.6 | |
| L-Isoleucine | Pf6N2E2_5989 | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | -3.6 | Yes |
| L-Isoleucine | Pf6N2E2_6001 | Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) | +1.7 | |
| L-Isoleucine | Pf6N2E2_6061 | Methylisocitrate lyase (EC 4.1.3.30) (from data) | -2.3 | |
| L-Isoleucine | Pf6N2E2_614 | 3-carboxymuconate cyclase | -1.1 | |
| L-Lysine | Pf6N2E2_2958 | ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) | -1.9 | Yes |
| L-Lysine | Pf6N2E2_2959 | ABC transporter for L-Lysine, permease component 1 (from data) | -2.1 | Yes |
| L-Lysine | Pf6N2E2_2960 | ABC transporter for L-Lysine, permease component 2 (from data) | -1.7 | Yes |
| L-Lysine | Pf6N2E2_4013 | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | -2.2 | Yes |
| L-Lysine | Pf6N2E2_4498 | Outer membrane porin, OprD family | -1.2 | |
| L-Lysine | Pf6N2E2_4513 | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | -1.4 | Yes |
| L-Lysine | Pf6N2E2_4777 | 5-aminopentanamidase (EC 3.5.1.30) (from data) | -5.0 | Yes |
| L-Lysine | Pf6N2E2_4778 | Lysine 2-monooxygenase (EC 1.13.12.2) (from data) | -4.3 | Yes |
| L-Lysine | Pf6N2E2_4779 | Transcriptional regulator, AsnC family | -5.0 | Yes |
| L-Lysine | Pf6N2E2_5442 | Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) | -1.2 | |
| L-Lysine | Pf6N2E2_614 | 3-carboxymuconate cyclase | -1.4 | |
| L-Phenylalanine | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -5.2 | |
| L-Phenylalanine | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -5.1 | |
| L-Phenylalanine | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -4.3 | |
| L-Phenylalanine | Pf6N2E2_148 | Membrane fusion component of tripartite multidrug resistance system | -1.5 | |
| L-Phenylalanine | Pf6N2E2_149 | Inner membrane component of tripartite multidrug resistance system | -1.3 | |
| L-Phenylalanine | Pf6N2E2_1672 | hypothetical protein | -3.8 | |
| L-Phenylalanine | Pf6N2E2_2629 | Phenylalanine hydroxylase transcriptional activator PhhR | -5.6 | Yes |
| L-Phenylalanine | Pf6N2E2_2630 | Phenylalanine 4-monooxygenase (EC 1.14.16.1) (from data) | -4.7 | Yes |
| L-Phenylalanine | Pf6N2E2_2632 | tyrosine aminotransferase (EC 2.6.1.57) (from data) | -4.6 | Yes |
| L-Phenylalanine | Pf6N2E2_2888 | Glucose-selective porin OprB | -1.7 | |
| L-Phenylalanine | Pf6N2E2_2921 | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | -1.4 | Yes |
| L-Phenylalanine | Pf6N2E2_2923 | ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) | -1.6 | Yes |
| L-Phenylalanine | Pf6N2E2_2924 | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) | -1.5 | Yes |
| L-Phenylalanine | Pf6N2E2_2926 | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data) | -1.7 | Yes |
| L-Phenylalanine | Pf6N2E2_3553 | Urease (EC 3.5.1.5) (from data) | -2.3 | |
| L-Phenylalanine | Pf6N2E2_4412 | Ammonium transporter | -2.1 | |
| L-Phenylalanine | Pf6N2E2_456 | 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) | -3.9 | Yes |
| L-Phenylalanine | Pf6N2E2_5045 | Permease of the drug/metabolite transporter (DMT) superfamily | -1.4 | |
| L-Phenylalanine | Pf6N2E2_5292 | Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) | -4.5 | Yes |
| L-Phenylalanine | Pf6N2E2_682 | Predicted regulator PutR for proline utilization, GntR family | -1.8 | |
| L-Proline | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -4.4 | |
| L-Proline | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -3.6 | |
| L-Proline | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -3.4 | |
| L-Proline | Pf6N2E2_2888 | Glucose-selective porin OprB | -2.0 | |
| L-Proline | Pf6N2E2_3531 | Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase | -1.6 | |
| L-Proline | Pf6N2E2_3684 | Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter | -2.7 | Yes |
| L-Proline | Pf6N2E2_3856 | Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | -1.6 | |
| L-Proline | Pf6N2E2_4097 | FIG00953365: hypothetical protein | -1.5 | |
| L-Proline | Pf6N2E2_4174 | Methionine ABC transporter substrate-binding protein | -1.6 | |
| L-Proline | Pf6N2E2_5845 | Nucleoside ABC transporter, periplasmic nucleoside-binding protein | -2.6 | |
| L-Proline | Pf6N2E2_5846 | Nucleoside ABC transporter, periplasmic nucleoside-binding protein | -2.1 | |
| L-Proline | Pf6N2E2_5873 | FIG00953467: hypothetical protein | +1.4 | |
| L-Serine | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -2.7 | |
| L-Serine | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -3.0 | |
| L-Serine | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -1.6 | |
| L-Serine | Pf6N2E2_2057 | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes | +1.9 | |
| L-Serine | Pf6N2E2_2329 | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | +1.4 | |
| L-Serine | Pf6N2E2_2441 | putative ATP/GTP-binding protein | +2.0 | |
| L-Serine | Pf6N2E2_2587 | Serine phosphatase RsbU, regulator of sigma subunit | +2.3 | |
| L-Serine | Pf6N2E2_2845 | RNA polymerase associated protein RapA (EC 3.6.1.-) | -1.8 | |
| L-Serine | Pf6N2E2_2862 | Uncharacterized PLP-dependent aminotransferase YfdZ | -1.5 | |
| L-Serine | Pf6N2E2_3456 | Inner membrane protein YfiN | +1.3 | |
| L-Serine | Pf6N2E2_3613 | GTP-binding protein HflX | +1.7 | |
| L-Serine | Pf6N2E2_3621 | putative transporter, required for glycine utilization (from data) | +1.8 | |
| L-Serine | Pf6N2E2_3684 | Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter | -1.6 | |
| L-Serine | Pf6N2E2_3983 | Membrane bound c-di-GMP receptor LapD | +3.0 | |
| L-Serine | Pf6N2E2_4028 | Biofilm PGA synthesis auxiliary protein PgaD | +1.4 | |
| L-Serine | Pf6N2E2_4029 | Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) | +1.9 | |
| L-Serine | Pf6N2E2_4030 | Biofilm PGA synthesis deacetylase PgaB (EC 3.-) | +1.7 | |
| L-Serine | Pf6N2E2_4031 | Biofilm PGA outer membrane secretin PgaA | +1.5 | |
| L-Serine | Pf6N2E2_4086 | sodium/alanine transporter | +5.1 | |
| L-Serine | Pf6N2E2_4087 | L-asparaginase (EC 3.5.1.1) (from data) | +2.7 | Yes |
| L-Serine | Pf6N2E2_4193 | Signal transduction histidine kinase | +1.4 | |
| L-Serine | Pf6N2E2_4194 | Two-component response regulator | +1.5 | |
| L-Serine | Pf6N2E2_4334 | Uncharacterized protein ImpC | +1.2 | |
| L-Serine | Pf6N2E2_4336 | Uncharacterized protein ImpA | +1.4 | |
| L-Serine | Pf6N2E2_4337 | Uncharacterized protein ImpI/VasC | +1.1 | |
| L-Serine | Pf6N2E2_4339 | Uncharacterized protein ImpJ/VasE | +1.1 | |
| L-Serine | Pf6N2E2_4341 | IcmF-related protein | +1.2 | |
| L-Serine | Pf6N2E2_4412 | Ammonium transporter | -1.7 | Yes |
| L-Serine | Pf6N2E2_4486 | Glycine cleavage system H protein | +1.4 | |
| L-Serine | Pf6N2E2_4498 | Outer membrane porin, OprD family | -1.2 | |
| L-Serine | Pf6N2E2_4513 | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | -1.6 | |
| L-Serine | Pf6N2E2_4683 | L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) | +6.3 | |
| L-Serine | Pf6N2E2_4702 | DgcA Dimethylglycine demethylase subunit A | +1.5 | Yes |
| L-Serine | Pf6N2E2_4754 | Protein rarD | -2.1 | |
| L-Serine | Pf6N2E2_4809 | COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases | -1.8 | |
| L-Serine | Pf6N2E2_4926 | hypothetical protein | +1.3 | |
| L-Serine | Pf6N2E2_5025 | Sensor histidine kinase | +2.1 | |
| L-Serine | Pf6N2E2_5296 | Threonine synthase (EC 4.2.3.1) | +1.1 | |
| L-Serine | Pf6N2E2_5402 | ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) | +1.7 | Yes |
| L-Serine | Pf6N2E2_5403 | ABC transporter for D-Alanine, permease component 2 (from data) | +2.0 | |
| L-Serine | Pf6N2E2_5404 | ABC transporter for D-Alanine, permease component 1 (from data) | +1.3 | Yes |
| L-Serine | Pf6N2E2_5459 | D-serine/D-alanine/glycine transporter | +1.3 | |
| L-Serine | Pf6N2E2_5491 | FOG: GGDEF domain | +2.0 | |
| L-Serine | Pf6N2E2_5556 | Aminomethyltransferase (EC 2.1.2.10) (from data) | +1.6 | |
| L-Serine | Pf6N2E2_5557 | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | -3.2 | Yes |
| L-Serine | Pf6N2E2_5559 | Glycine cleavage system H protein | +3.3 | |
| L-Serine | Pf6N2E2_5860 | Branched-chain amino acid transport system carrier protein | +1.7 | |
| L-Serine | Pf6N2E2_5989 | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | -1.6 | Yes |
| L-Serine | Pf6N2E2_6001 | Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) | +1.7 | |
| L-Serine | Pf6N2E2_61 | Cys regulon transcriptional activator CysB | +1.3 | |
| L-Serine | Pf6N2E2_802 | Threonine dehydratase biosynthetic (EC 4.3.1.19) | -2.2 | |
| Parabanic Acid | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -1.9 | |
| Parabanic Acid | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -2.1 | |
| Parabanic Acid | Pf6N2E2_3552 | Urease accessory protein UreD | -4.3 | Yes |
| Parabanic Acid | Pf6N2E2_3553 | Urease (EC 3.5.1.5) (from data) | -3.8 | Yes |
| Parabanic Acid | Pf6N2E2_3556 | Urease (EC 3.5.1.5) (from data) | -3.4 | |
| Parabanic Acid | Pf6N2E2_3570 | Urease accessory protein UreE | -2.6 | Yes |
| Parabanic Acid | Pf6N2E2_3572 | Urease accessory protein UreG | -3.5 | Yes |
| Parabanic Acid | Pf6N2E2_5564 | Membrane protein glpM | -1.3 | Yes |
| Putrescine Dihydrochloride | Pf6N2E2_148 | Membrane fusion component of tripartite multidrug resistance system | -1.5 | |
| Putrescine Dihydrochloride | Pf6N2E2_149 | Inner membrane component of tripartite multidrug resistance system | -1.7 | |
| Putrescine Dihydrochloride | Pf6N2E2_2888 | Glucose-selective porin OprB | -1.6 | |
| Putrescine Dihydrochloride | Pf6N2E2_3592 | Protein containing transglutaminase-like domain, putative cysteine protease | -1.2 | |
| Putrescine Dihydrochloride | Pf6N2E2_3593 | Protein containing domains DUF404, DUF407, DUF403 | -1.1 | |
| Putrescine Dihydrochloride | Pf6N2E2_4509 | Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) | -5.5 | Yes |
| Putrescine Dihydrochloride | Pf6N2E2_4512 | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) | -2.8 | Yes |
| Putrescine Dihydrochloride | Pf6N2E2_4513 | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | -4.0 | Yes |
| Putrescine Dihydrochloride | Pf6N2E2_4514 | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | -2.1 | Yes |
| Sodium nitrate | Pf6N2E2_1072 | LmbE-like protein | variable | |
| Sodium nitrate | Pf6N2E2_1114 | Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | -1.1 | Yes |
| Sodium nitrate | Pf6N2E2_1672 | hypothetical protein | variable | |
| Sodium nitrate | Pf6N2E2_1679 | SUGAR TRANSPORTER | +1.1 | |
| Sodium nitrate | Pf6N2E2_2374 | Nitrate ABC transporter, nitrate-binding protein | -2.0 | Yes |
| Sodium nitrate | Pf6N2E2_2376 | nitrate transporter (from data) | -2.1 | Yes |
| Sodium nitrate | Pf6N2E2_2378 | Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) | -2.4 | Yes |
| Sodium nitrate | Pf6N2E2_2380 | Nitrate reductase (EC 1.7.99.4) (from data) | -2.9 | Yes |
| Sodium nitrate | Pf6N2E2_2772 | Uracil-DNA glycosylase, family 1 | +1.0 | |
| Sodium nitrate | Pf6N2E2_4412 | Ammonium transporter | -1.6 | Yes |
| Sodium nitrate | Pf6N2E2_5734 | NLP/P60 family protein | variable | |
| Sodium nitrite | Pf6N2E2_1076 | 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) | -1.4 | |
| Sodium nitrite | Pf6N2E2_1672 | hypothetical protein | -1.6 | |
| Sodium nitrite | Pf6N2E2_2118 | Trehalose synthase (EC 5.4.99.16) | variable | |
| Sodium nitrite | Pf6N2E2_2120 | Alpha-amylase (EC 3.2.1.1) | -2.0 | |
| Sodium nitrite | Pf6N2E2_2772 | Uracil-DNA glycosylase, family 1 | +1.1 | |
| Sodium nitrite | Pf6N2E2_3334 | Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19) | -1.6 | |
| Sodium nitrite | Pf6N2E2_3587 | Azurin | -2.3 | |
| Sodium nitrite | Pf6N2E2_4124 | Uncharacterized protein with LysM domain, COG1652 | -1.0 | |
| Sodium nitrite | Pf6N2E2_4813 | Probable two-component sensor, near polyamine transporter | -1.9 | |
| Sodium nitrite | Pf6N2E2_5308 | Transcriptional regulator, AraC family | variable | Yes |
| Sodium nitrite | Pf6N2E2_5309 | Permease of the drug/metabolite transporter (DMT) superfamily | variable | Yes |
| Sodium nitrite | Pf6N2E2_5471 | Transcriptional activator MetR | variable | Yes |
| Sodium nitrite | Pf6N2E2_5734 | NLP/P60 family protein | -1.6 | |
| Sodium nitrite | Pf6N2E2_5788 | ABC transporter permease protein | -1.1 | |
| Sodium nitrite | Pf6N2E2_762 | FIG00960186: hypothetical protein | +1.6 | |
| Urea | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -3.2 | |
| Urea | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -2.8 | |
| Urea | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -1.5 | |
| Urea | Pf6N2E2_1672 | hypothetical protein | -4.0 | |
| Urea | Pf6N2E2_2057 | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes | variable | |
| Urea | Pf6N2E2_2888 | Glucose-selective porin OprB | -1.6 | |
| Urea | Pf6N2E2_3393 | Queuosine Biosynthesis QueC ATPase | -1.5 | |
| Urea | Pf6N2E2_3552 | Urease accessory protein UreD | -4.6 | Yes |
| Urea | Pf6N2E2_3553 | Urease (EC 3.5.1.5) (from data) | -4.6 | Yes |
| Urea | Pf6N2E2_3556 | Urease (EC 3.5.1.5) (from data) | -4.2 | |
| Urea | Pf6N2E2_3570 | Urease accessory protein UreE | -2.9 | Yes |
| Urea | Pf6N2E2_3571 | Urease accessory protein UreF | -4.6 | |
| Urea | Pf6N2E2_3572 | Urease accessory protein UreG | -3.7 | Yes |
| Urea | Pf6N2E2_5229 | Transcriptional regulator, MerR family, associated with photolyase | +1.5 | |
| Urea | Pf6N2E2_5564 | Membrane protein glpM | -1.0 | Yes |
| Uridine | Pf6N2E2_1189 | Thioredoxin reductase (EC 1.8.1.9) | -3.4 | |
| Uridine | Pf6N2E2_1190 | Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase | -3.1 | |
| Uridine | Pf6N2E2_1191 | Thiaminase II (EC 3.5.99.2) | -2.4 | |
| Uridine | Pf6N2E2_2120 | Alpha-amylase (EC 3.2.1.1) | -1.1 | |
| Uridine | Pf6N2E2_3463 | Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) | -3.2 | Yes |
| Uridine | Pf6N2E2_3464 | LysR family transcriptional regulator PA0133 | -3.6 | Yes |
| Uridine | Pf6N2E2_3871 | FIG00553872: hypothetical protein | +1.5 | |
| Uridine | Pf6N2E2_4509 | Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) | -4.3 | |
| Uridine | Pf6N2E2_4658 | FIG00955006: hypothetical protein | -1.9 | |
| Uridine | Pf6N2E2_496 | Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) | -4.4 | Yes |
| Uridine | Pf6N2E2_497 | Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism | -4.0 | Yes |
| Uridine | Pf6N2E2_498 | Dihydropyrimidinase (EC 3.5.2.2) (from data) | -3.0 | Yes |
| Uridine | Pf6N2E2_499 | Possible pyrimidine permease in reductive pathway | -3.3 | Yes |