Specific Phenotypes for Sinorhizobium meliloti 1021 in nitrogen source experiments

Condition	Gene	Description	Fitness	Cons.
Cytosine	SMc04339	hypothetical protein	+1.1
D-Glucosamine Hydrochloride	SM_b21216	ABC transporter for D-Glucosamine, ATPase component (from data)	-3.3
D-Glucosamine Hydrochloride	SM_b21217	glucosamine kinase (EC 2.7.1.8) (from data)	-3.1
D-Glucosamine Hydrochloride	SM_b21219	ABC transporter for D-Glucosamine, permease component 1 (from data)	-3.5
D-Glucosamine Hydrochloride	SM_b21220	ABC transporter for D-Glucosamine, permease component 2 (from data)	-2.6
D-Glucosamine Hydrochloride	SM_b21221	ABC transporter for D-Glucosamine, periplasmic substrate-binding protein (from data)	-2.6
D-Glucosamine Hydrochloride	SM_b21222	transcriptional regulator	+2.7
D-Glucosamine Hydrochloride	SM_b21464	GntR family transcriptional regulator	+1.9
Gelatin	SM_b20259	dihydrodipicolinate synthase	-1.4
Gelatin	SM_b20966	beta-galactosidase	-2.2
Gelatin	SMc01851	amino acid efflux protein	-1.3
Gly-DL-Asp	SMc00786	periplasmic dipeptide-binding protein	-2.3	Yes
Gly-DL-Asp	SMc00790	peptide ABC transporter ATP-binding protein	-2.5
L-Arginine	SMc00171	hypothetical protein	+1.8
L-Arginine	SMc01848	hypothetical protein	+2.2
L-Arginine	SMc02490	hypothetical protein	+2.0
L-Arginine	SMc03961	sulfolipid (UDP-sulfoquinovose) biosynthesis protein	+2.0
L-Arginine	SMc03963	sulfolipid biosynthesis protein	+1.4
L-Arginine	SMc04081	glycosyl transferase (sulfolipid biosynthesis) protein	+2.1
L-Histidine	SM_b20048	transcriptional regulator	-2.5
L-Histidine	SM_b21163	Urocanate hydratase (EC 4.2.1.49) (from data)	-2.0	Yes
L-Histidine	SMc00673	Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data)	-2.9	Yes
L-Leucine	SM_b21114	nitrate transport protein	-1.7
L-Leucine	SMc01948	high-affinity branched-chain amino acid ABC transporter ATP-binding protein	-3.5	Yes
L-Leucine	SMc01950	high-affinity branched-chain amino acid ABC transporter permease	-2.0
L-Leucine	SMc02240	hypothetical protein	-3.0	Yes
L-Serine	SMc01256	L-serine dehydratase	-1.9	Yes
N-Acetyl-D-Glucosamine	SM_b21155	hypothetical protein	+1.0
N-Acetyl-D-Glucosamine	SM_b21158	transcriptional regulator	+1.3	Yes
N-Acetyl-D-Glucosamine	SMa0078	LacI family transcriptional regulator	-1.3
N-Acetyl-D-Glucosamine	SMc02869	N-Acetyl-D-glucosamine ABC transport system, ATPase component (from data)	-4.7
N-Acetyl-D-Glucosamine	SMc02870	oxidoreductase	-3.3
N-Acetyl-D-Glucosamine	SMc02871	ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data)	-5.2
N-Acetyl-D-Glucosamine	SMc02872	ABC transporter for N-Acetyl-D-glucosamine, permease protein 1 (from data)	-4.3
N-Acetyl-D-Glucosamine	SMc02873	N-Acetyl-D-glucosamine ABC transport system, periplasmic substrate-binding component (from data)	-4.1
N-Acetyl-D-Glucosamine	SMc02874	N-acetylmuramic acid 6-phosphate etherase	-3.9
N-Acetyl-D-Glucosamine	SMc02875	N-acetylglucosamine kinase (EC 2.7.1.59) (from data)	-3.4	Yes
Sodium nitrate	SM_b20983	hypothetical protein	-3.7
Sodium nitrate	SM_b20984	Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data)	-5.2	Yes
Sodium nitrate	SM_b20986	Nitrate reductase (EC 1.7.99.4) (from data)	-1.4	Yes
Sodium nitrate	SMa0246	GntR family transcriptional regulator	+1.0
Sodium nitrate	SMc03883	monofunctional biosynthetic peptidoglycan transglycosylase	+1.4
Uridine	SMc00775	iron(III) permease	-1.5
Uridine	SMc00781	malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data)	-2.9	Yes
Uridine	SMc00784	iron binding protein	-1.7
Uridine	SMc01174	cysteine synthase A	-1.9
Uridine	SMc01814	oxidoreductase	-5.6	Yes
Uridine	SMc01815	Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data)	-4.8	Yes
Uridine	SMc01820	Beta-ureidopropionase (EC 3.5.1.6) (from data)	-4.6	Yes
Uridine	SMc01821	Dihydropyrimidinase (EC 3.5.2.2) (from data)	-4.8	Yes
Uridine	SMc02068	ABC transporter ATP-binding protein	-1.7