Specific Phenotypes for Herbaspirillum seropedicae SmR1 in nitrogen fixation control experiments

Condition Gene Description Fitness Cons.
D-Glucose HSERO_RS01920 50S ribosomal protein L11 methyltransferase -1.6  
D-Glucose HSERO_RS02810 methyltransferase +1.8  
D-Glucose HSERO_RS03215 sodium:solute symporter -2.4  
D-Glucose HSERO_RS03225 histidine kinase -3.2  
D-Glucose HSERO_RS03230 transcriptional regulator -3.3  
D-Glucose HSERO_RS03495 NAD(P) transhydrogenase subunit beta -1.5  
D-Glucose HSERO_RS04290 DNA-binding protein +1.9  
D-Glucose HSERO_RS04950 deacetylase -4.3  
D-Glucose HSERO_RS05470 permease -1.5  
D-Glucose HSERO_RS05475 gluconokinase -1.9  
D-Glucose HSERO_RS08150 phasin family protein +2.6  
D-Glucose HSERO_RS08320 amino acid ABC transporter substrate-binding protein +1.3  
D-Glucose HSERO_RS08995 hypothetical protein -1.1  
D-Glucose HSERO_RS10545 protein disaggregation chaperone -2.4  
D-Glucose HSERO_RS10565 isocitrate lyase -1.6  
D-Glucose HSERO_RS10675 diguanylate cyclase +2.9  
D-Glucose HSERO_RS14630 histone acetyltransferase -1.7  
D-Glucose HSERO_RS15790 chemotaxis protein -4.1  
D-Glucose HSERO_RS16180 membrane protein +1.4  
D-Glucose HSERO_RS17645 TonB-denpendent receptor variable  
D-Glucose HSERO_RS17650 hypothetical protein variable  
D-Glucose HSERO_RS17870 glucokinase -1.3  
D-Glucose HSERO_RS18375 diguanylate cyclase -1.1  
D-Glucose HSERO_RS23840 hypothetical protein +1.1  
D-Glucose HSERO_RS23885 XRE family transcriptional regulator +2.4  
L-Malic acid HSERO_RS01300 phosphate acetyltransferase -1.5  
L-Malic acid HSERO_RS01490 guanylate cyclase +1.4  
L-Malic acid HSERO_RS01515 hemin-binding protein +1.2  
L-Malic acid HSERO_RS01520 hemagglutinin +1.1  
L-Malic acid HSERO_RS01525 hypothetical protein +1.1  
L-Malic acid HSERO_RS01535 phosphohydrolase with GAF sensor +1.5  
L-Malic acid HSERO_RS01920 50S ribosomal protein L11 methyltransferase -1.8  
L-Malic acid HSERO_RS02615 polymerase -2.7  
L-Malic acid HSERO_RS04290 DNA-binding protein +2.4  
L-Malic acid HSERO_RS04295 diguanylate cyclase -2.7  
L-Malic acid HSERO_RS04950 deacetylase +1.5  
L-Malic acid HSERO_RS07130 hypothetical protein -2.3  
L-Malic acid HSERO_RS08150 phasin family protein +1.5  
L-Malic acid HSERO_RS08175 D-alanyl-D-alanine carboxypeptidase -1.3  
L-Malic acid HSERO_RS08185 sulfate transporter subunit -2.7  
L-Malic acid HSERO_RS09430 peptidase S49 -1.1  
L-Malic acid HSERO_RS10155 antiactivator of flagellar biosynthesis FleN protein -2.5  
L-Malic acid HSERO_RS10545 protein disaggregation chaperone -1.3  
L-Malic acid HSERO_RS10615 transcription elongation factor GreB -1.5  
L-Malic acid HSERO_RS10655 ribonuclease PH -1.2  
L-Malic acid HSERO_RS11225 branched-chain amino acid ABC transporter permease +1.0  
L-Malic acid HSERO_RS11235 branched-chain amino acid ABC transporter substrate-binding protein +1.1  
L-Malic acid HSERO_RS11405 transcriptional regulator -3.6  
L-Malic acid HSERO_RS12395 TetR family transcriptional regulator +3.8  
L-Malic acid HSERO_RS12850 LuxR family transcriptional regulator +2.2  
L-Malic acid HSERO_RS12860 histidine kinase +2.2  
L-Malic acid HSERO_RS13620 diguanylate cyclase +2.6  
L-Malic acid HSERO_RS13930 competence protein ComEC +4.3  
L-Malic acid HSERO_RS13935 DNAase +4.2  
L-Malic acid HSERO_RS14680 histidine kinase +1.6  
L-Malic acid HSERO_RS15140 chemotaxis protein CheY +1.3  
L-Malic acid HSERO_RS15790 chemotaxis protein -4.0  
L-Malic acid HSERO_RS16560 2-hydroxyacid dehydrogenase -1.6  
L-Malic acid HSERO_RS18605 histidine kinase -1.3  
L-Malic acid HSERO_RS18720 transcriptional regulator +1.2  
L-Malic acid HSERO_RS20340 DNA methylase N-4 -1.4  
L-Malic acid HSERO_RS20810 amidophosphoribosyltransferase +2.7  
L-Malic acid HSERO_RS20865 ABC transporter permease +1.3  
L-Malic acid HSERO_RS21125 malate:quinone oxidoreductase +1.7  
L-Malic acid HSERO_RS21195 hypothetical protein -3.4  
L-Malic acid HSERO_RS21210 membrane protein -3.8  
L-Malic acid HSERO_RS21220 hypothetical protein -3.3  
L-Malic acid HSERO_RS21225 hypothetical protein -3.2  
L-Malic acid HSERO_RS21395 histone acetyltransferase -1.5  
L-Malic acid HSERO_RS21415 lytic transglycosylase -1.4  
L-Malic acid HSERO_RS23180 membrane protein -1.1  
L-Malic acid HSERO_RS23505 transcriptional regulator +2.4