Specific Phenotypes for Parabacteroides merdae CL09T00C40 in mouse experiments

Condition	Gene	Description	Fitness	Cons.
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS00900	efflux RND transporter permease subunit	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS01070	DUF4925 domain-containing protein	+1.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS01360	efflux RND transporter permease subunit	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS01370	alkaline phosphatase	-2.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS01690	SLC13 family permease	variable	Yes
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS01720	PCMD domain-containing protein	+2.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS05340	acyl-CoA thioesterase	+1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS05990	alanine/glycine:cation symporter family protein	-1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS06210	dihydrodipicolinate synthase family protein	-1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS07595	pyridoxal phosphate-dependent aminotransferase	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS08280	carboxymuconolactone decarboxylase family protein	+1.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS11860	family 20 glycosylhydrolase	+1.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS11975	nicotinamide riboside transporter PnuC	-2.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS12200	dihydrodipicolinate synthase family protein	+1.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS13285	PCMD domain-containing protein	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS13290	porin family protein	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS14740	thiamine pyrophosphate-dependent enzyme	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS15355	hypothetical protein	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS15410	DUF1015 domain-containing protein	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS15715	TetR/AcrR family transcriptional regulator	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS15865	DUF5686 family protein	variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS17045	ATP-dependent Clp protease ATP-binding subunit ClpX	variable
diet=StandardDiet; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS10365	fructose-bisphosphatase class III	+1.3
diet=StandardDiet; sample=FecalPellet; inoculation=Mono	HMPREF1078_RS12105	porin family protein	-1.3