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Specific Phenotypes for
Phocaeicola vulgatus CL09T03C04
in mouse experiments
Condition
Gene
Description
Fitness
Cons.
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS00470
redox-sensing transcriptional repressor Rex
-1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01140
ATP-binding protein
-1.5
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01145
sigma-54-dependent Fis family transcriptional regulator
-2.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01155
TolC family protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01160
HlyD family efflux transporter periplasmic adaptor subunit
-3.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01170
ABC transporter permease
-2.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01765
excinuclease ABC subunit UvrB
-4.2
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01770
porin
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01775
YigZ family protein
-1.9
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS02515
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
-1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS02935
sulfotransferase
-1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS02940
sulfate adenylyltransferase subunit CysN
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS02945
sulfate adenylyltransferase subunit CysD
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS02950
adenylyl-sulfate kinase
-1.5
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS02965
BamA/TamA family outer membrane protein
-1.5
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS03595
hypothetical protein
-1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS03635
YjbH domain-containing protein
-1.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS04010
molecular chaperone HtpG
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS04675
amidophosphoribosyltransferase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS06385
transglutaminase domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07115
TolC family protein
-1.2
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07405
sialate O-acetylesterase
-1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07680
radical SAM family heme chaperone HemW
-1.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07785
signal peptidase I
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07795
6-bladed beta-propeller
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07815
6-bladed beta-propeller
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07825
DUF4221 family protein
-2.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07835
DUF1573 domain-containing protein
-2.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07900
DUF1573 domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07975
family 10 glycosylhydrolase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08105
glycoside hydrolase family 88 protein
-2.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08695
RagB/SusD family nutrient uptake outer membrane protein
-1.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08700
SusC/RagA family TonB-linked outer membrane protein
-1.5
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08895
right-handed parallel beta-helix repeat-containing protein
-1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08955
glycoside hydrolase family 130 protein
-1.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS09010
GH92 family glycosyl hydrolase
-2.2
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS09530
LacI family DNA-binding transcriptional regulator
-3.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10505
DUF4981 domain-containing protein
-1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10760
sulfatase
-1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10795
SusD/RagB family nutrient-binding outer membrane lipoprotein
-2.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS11260
arylsulfatase
-1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS11525
excinuclease ABC subunit UvrC
-3.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS11775
response regulator
+1.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS11875
hypothetical protein
-5.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS12085
NUDIX domain-containing protein
-1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS12090
tetratricopeptide repeat protein
-1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS12230
glycoside hydrolase
-2.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS12365
DNA repair protein RecO
-3.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS12905
kinase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS13030
TonB-dependent receptor
+1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS13160
response regulator
+1.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS13545
RagB/SusD family nutrient uptake outer membrane protein
+1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS14030
DUF3822 family protein
-3.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS14990
DUF4091 domain-containing protein
-1.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS15200
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS15805
PAS domain-containing protein
-2.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16420
RagB/SusD family nutrient uptake outer membrane protein
-3.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16425
TonB-dependent receptor
-3.9
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16430
FecR domain-containing protein
-2.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16435
RNA polymerase sigma-70 factor
-4.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16485
cyclomaltodextrinase C-terminal domain-containing protein
+1.9
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16640
hypothetical protein
-2.7
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16785
putative DNA modification/repair radical SAM protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16790
TlpA family protein disulfide reductase
-1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS17135
DNA replication and repair protein RecF
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS17230
glycoside hydrolase family 95 protein
-1.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS17455
hypothetical protein
-1.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS17835
choice-of-anchor J domain-containing protein
-1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS18215
serine protease
-1.2
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS20210
glycosyltransferase
-1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS00135
isoaspartyl peptidase/L-asparaginase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS00175
hypothetical protein
+1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS00605
prolipoprotein diacylglyceryl transferase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS00705
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
+1.5
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS0119650
1-acyl-sn-glycerol-3-phosphate acyltransferase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS0119660
DNA cytosine methyltransferase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS01250
DUF4738 domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS01425
sirohydrochlorin cobaltochelatase
+1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS01520
helix-turn-helix transcriptional regulator
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS01675
AraC family transcriptional regulator
-3.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02280
carboxypeptidase regulatory-like domain-containing protein
-2.9
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02400
putative transporter
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02935
sulfotransferase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02940
sulfate adenylyltransferase subunit CysN
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02945
sulfate adenylyltransferase subunit CysD
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02950
adenylyl-sulfate kinase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02955
SLC13/DASS family transporter
variable
Yes
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02960
3'(2'),5'-bisphosphate nucleotidase CysQ
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02965
BamA/TamA family outer membrane protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS03595
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS03720
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
-2.9
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS03725
pyruvate, phosphate dikinase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS04435
hypothetical protein
-4.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS05030
M23 family metallopeptidase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS05355
helix-turn-helix domain-containing protein
+1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS05810
MFS transporter
-2.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS05945
DUF4836 family protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS05950
ATP-binding cassette domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS05955
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS06250
AMP-binding protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS06280
S9 family peptidase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS06285
hypothetical protein
-4.5
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS06290
lipocalin-like domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS06355
threonine ammonia-lyase
+1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS06385
transglutaminase domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS06660
NUDIX hydrolase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS07330
efflux RND transporter permease subunit
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS08250
malate dehydrogenase
-1.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS08490
DUF2156 domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS08670
SusD family outer membrane lipoprotein NanU
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS08675
TonB-dependent receptor
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS08800
glycosidase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS09005
RNA polymerase sigma-70 factor
-1.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS09010
GH92 family glycosyl hydrolase
-2.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS09145
TonB-dependent receptor
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS09150
RagB/SusD family nutrient uptake outer membrane protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS09580
aldo/keto reductase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10245
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10250
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10305
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10505
DUF4981 domain-containing protein
-5.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10625
beta-ketoacyl synthase chain length factor
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10655
hydroxymyristoyl-ACP dehydratase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10680
NAD(P)/FAD-dependent oxidoreductase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10690
AMP-binding protein
-1.2
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10790
SusC/RagA family TonB-linked outer membrane protein
+1.2
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS10805
FecR family protein
+2.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS11435
DNA mismatch repair protein MutS
variable
Yes
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS11750
SDR family oxidoreductase
-2.4
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS12560
redoxin domain-containing protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS12800
TonB-dependent receptor
-1.9
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS12825
alkaline phosphatase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS13110
EpsG family protein
-1.1
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS13700
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS13705
TonB-dependent receptor
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS13985
ADP-ribosylglycohydrolase family protein
-1.9
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS14185
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS14365
NADH:flavin oxidoreductase
+1.3
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS14415
sodium ion-translocating decarboxylase subunit beta
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS14675
Gfo/Idh/MocA family oxidoreductase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS14820
tetratricopeptide repeat protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS15385
metallophosphoesterase
-1.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS16420
RagB/SusD family nutrient uptake outer membrane protein
variable
Yes
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS16425
TonB-dependent receptor
variable
Yes
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS16640
hypothetical protein
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS17635
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
-2.0
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS17695
YihY/virulence factor BrkB family protein
-2.6
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS17870
metallophosphoesterase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS18000
nitronate monooxygenase
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS18040
cytochrome d ubiquinol oxidase subunit II
-3.8
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS18045
cytochrome ubiquinol oxidase subunit I
-2.8
Yes
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS18215
serine protease
variable
diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS18420
DUF3805 domain-containing protein
-1.8
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01145
sigma-54-dependent Fis family transcriptional regulator
-1.5
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01765
excinuclease ABC subunit UvrB
-4.1
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS01780
3'-5' exonuclease
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS02560
pyridoxamine 5'-phosphate oxidase family protein
-2.8
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07785
signal peptidase I
-2.0
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07795
6-bladed beta-propeller
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07815
6-bladed beta-propeller
-3.2
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07825
DUF4221 family protein
-3.1
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS07880
6-bladed beta-propeller
-2.6
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08105
glycoside hydrolase family 88 protein
-3.1
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08370
DUF5110 domain-containing protein
-2.3
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS08865
L-rhamnose isomerase
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS09010
GH92 family glycosyl hydrolase
-1.6
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS09530
LacI family DNA-binding transcriptional regulator
-4.4
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10535
response regulator
-2.0
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10545
TonB-dependent receptor
-1.8
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10550
RagB/SusD family nutrient uptake outer membrane protein
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10555
bacterial Ig-like domain-containing protein
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10560
arabinan endo-1,5-alpha-L-arabinosidase
-2.0
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10635
polysaccharide deacetylase family protein
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS10760
sulfatase
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS11050
gluconate 5-dehydrogenase
-1.8
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS11055
5-dehydro-4-deoxy-D-glucuronate isomerase
-1.5
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS11525
excinuclease ABC subunit UvrC
-5.3
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS12230
glycoside hydrolase
-2.8
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS12365
DNA repair protein RecO
-5.1
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS13520
5-dehydro-4-deoxy-D-glucuronate isomerase
-2.5
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS13525
PTS sugar transporter subunit IIC
-2.1
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS14030
DUF3822 family protein
-1.5
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS14715
DNA repair protein RadA
-2.0
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS15275
NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS15805
PAS domain-containing protein
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16640
hypothetical protein
-2.2
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS16785
putative DNA modification/repair radical SAM protein
-4.8
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS17135
DNA replication and repair protein RecF
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS17455
hypothetical protein
variable
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS17495
DUF4981 domain-containing protein
-1.0
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS18040
cytochrome d ubiquinol oxidase subunit II
-1.8
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS18045
cytochrome ubiquinol oxidase subunit I
-1.5
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS18225
DNA repair protein RecN
-2.5
diet=StandardDiet; sample=FecalPellet; inoculation=MixComm
HMPREF1058
_RS21715
hypothetical protein
+1.7
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02180
efflux RND transporter periplasmic adaptor subunit
-1.5
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02190
ABC transporter permease
-1.3
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02940
sulfate adenylyltransferase subunit CysN
-1.2
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS02945
sulfate adenylyltransferase subunit CysD
-1.7
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS08370
DUF5110 domain-containing protein
-1.4
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS08765
AMP-binding protein
+1.4
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS09525
xylanase
+2.0
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS11165
glycoside hydrolase family 127 protein
+2.0
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS11435
DNA mismatch repair protein MutS
+3.6
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS14405
OadG family protein
-2.2
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS14415
sodium ion-translocating decarboxylase subunit beta
-1.5
diet=StandardDiet; sample=FecalPellet; inoculation=Mono
HMPREF1058
_RS18040
cytochrome d ubiquinol oxidase subunit II
-1.6