Specific Phenotypes for Klebsiella michiganensis M5al in mixed community experiments

Condition Gene Description Fitness Cons.
0.1mM glass beads BWI76_RS17250 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -2.2  
Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella BWI76_RS21260 two-component sensor histidine kinase -1.4  
Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella BWI76_RS27240 hypothetical protein variable  
Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella BWI76_RS06125 D-alanine--D-alanine ligase A +1.2  
Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella BWI76_RS01715 shikimate 5-dehydrogenase +1.0  
Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella BWI76_RS03260 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -1.1  
Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella BWI76_RS15485 putative universal stress protein G -1.5  
Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella BWI76_RS07135 hypothetical protein -1.1  
Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella BWI76_RS21260 two-component sensor histidine kinase -1.9  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS01225 magnesium transporter CorA +2.6  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS01900 tRNA-dihydrouridine synthase A -2.6  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS06440 AP endonuclease variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS06675 nickel/cobalt efflux protein RcnA -1.4  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS08760 biotin synthase -3.7  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS09200 hypothetical protein -1.5  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS10475 binding-protein-dependent transport system inner membrane protein -1.4  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS10480 amino acid ABC transporter substrate-binding protein -1.4  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS11565 DeoR family transcriptional regulator -1.2  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS15965 MFS transporter -1.8  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS19420 Fe-S-binding ATPase -1.2  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS21010 Negative regulator of nickel and cobalt uptake (YfgG) (from data) -1.7  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS21540 membrane protein +2.7  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL BWI76_RS23985 erythrose-4-phosphate dehydrogenase -2.3  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS01225 magnesium transporter CorA +2.8  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS01900 tRNA-dihydrouridine synthase A variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS02025 LysR family transcriptional regulator -1.1  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS04990 pantoate--beta-alanine ligase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase -2.5  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS08760 biotin synthase -3.1  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS08775 dethiobiotin synthase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS08790 two-component sensor histidine kinase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS08795 DNA-binding response regulator variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS09200 hypothetical protein -1.5  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS10475 binding-protein-dependent transport system inner membrane protein variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS10480 amino acid ABC transporter substrate-binding protein -1.6  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS10710 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS12360 hypothetical protein -1.3  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS21260 two-component sensor histidine kinase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS21540 membrane protein +3.2  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL BWI76_RS23985 erythrose-4-phosphate dehydrogenase -3.2  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS01225 magnesium transporter CorA +3.0  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS01900 tRNA-dihydrouridine synthase A -3.4  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS03345 prophage P4 integrase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS04990 pantoate--beta-alanine ligase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS06675 nickel/cobalt efflux protein RcnA -3.5  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS08760 biotin synthase -3.9  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS08775 dethiobiotin synthase variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS09600 macrolide ABC transporter permease/ATP-binding protein MacB -1.9  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS10710 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS18800 transcriptional regulator +1.4  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS21485 DUF4154 domain-containing protein +1.4  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS21490 GGDEF domain-containing protein +1.4  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS21540 membrane protein variable  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS23825 hypothetical protein -1.7  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS23985 erythrose-4-phosphate dehydrogenase -2.7  
Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL BWI76_RS26765 phosphodiesterase variable  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL BWI76_RS00790 bifunctional aspartokinase II/homoserine dehydrogenase II +1.5  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL BWI76_RS04850 N-acetylmuramoyl-L-alanine amidase variable  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL BWI76_RS08190 MFS transporter -1.4  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL BWI76_RS09590 ATP-dependent OLD family endonuclease variable  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL BWI76_RS16345 nucleoid-associated protein variable  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL BWI76_RS20925 peptidase M48 variable  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL BWI76_RS22870 LOG family protein variable  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL BWI76_RS14310 hypothetical protein -1.9  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL BWI76_RS25910 peptidyl-prolyl cis-trans isomerase -1.6  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL BWI76_RS26765 phosphodiesterase -1.2  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL BWI76_RS22070 proline/betaine ABC transporter permease ProW -1.4  
Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL BWI76_RS26765 phosphodiesterase -1.3  
sand BWI76_RS17250 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -2.2