Private Fitness
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Specific Phenotypes for
Ralstonia sp. UNC404CL21Col
in in planta experiments
Condition
Gene
Description
Fitness
Cons.
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct
ABZR87
_RS08600
deoxyribodipyrimidine photo-lyase
-2.2
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct
ABZR87
_RS11135
heavy metal translocating P-type ATPase
-1.3
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct
ABZR87
_RS11145
cytochrome-c oxidase, cbb3-type subunit I
-1.4
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct
ABZR87
_RS11485
ATP-dependent chaperone ClpB
-1.3
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct
ABZR87
_RS14090
phosphate ABC transporter permease PstA
-1.5
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct
ABZR87
_RS14100
phosphate ABC transporter substrate-binding protein PstS
-1.1
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS05500
RNA polymerase sigma-70 factor
variable
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS12590
amino acid permease
variable
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS15880
bifunctional glycoside hydrolase 114/ polysaccharide deacetylase family protein
+1.6
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS15990
aldehyde dehydrogenase family protein
-1.6
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS20435
TonB-dependent receptor
+2.1
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS23355
diguanylate cyclase
+3.3
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS23365
hybrid sensor histidine kinase/response regulator
variable
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS23370
chemotaxis protein CheW
variable
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS23375
CheR family methyltransferase
variable
Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB
ABZR87
_RS23385
methyl-accepting chemotaxis protein
variable