Specific Phenotypes for Azospirillum brasilense Sp245 in carbon source experiments

Condition Gene Description Fitness Cons.
D-Fructose AZOBR_RS04265 2-isopropylmalate synthase -2.0  
D-Fructose AZOBR_RS32325 Fructose PTS system (E-I, HPr, and E-IIA components) (from data) -2.5 Yes
D-Fructose AZOBR_RS32335 fructose-specific PTS system (fructose 1-phosphate forming), EII-B'BC components (FruA) (from data) -2.3 Yes
D-Gluconic Acid sodium salt AZOBR_RS00885 regulator +1.5  
D-Gluconic Acid sodium salt AZOBR_RS09480 4-alpha-glucanotransferase +1.3  
D-Gluconic Acid sodium salt AZOBR_RS09670 hypothetical protein variable  
D-Gluconic Acid sodium salt AZOBR_RS10005 MucR family transcriptional regulator -2.5  
D-Gluconic Acid sodium salt AZOBR_RS10760 chemotaxis protein -1.5  
D-Gluconic Acid sodium salt AZOBR_RS12825 cytochrome B561 +1.6  
D-Gluconic Acid sodium salt AZOBR_RS15915 gluconate TRAP transporter, periplasmic solute-binding component (from data) -2.7 Yes
D-Gluconic Acid sodium salt AZOBR_RS15920 Large component of TRAP-type D-gluconate transporter (from data) -2.9 Yes
D-Gluconic Acid sodium salt AZOBR_RS15925 gluconate TRAP transporter, small permease component (from data) -2.6  
D-Gluconic Acid sodium salt AZOBR_RS18690 quinolinate synthetase +1.5  
D-Gluconic Acid sodium salt AZOBR_RS20450 hydroxyacylglutathione hydrolase +1.2  
D-Gluconic Acid sodium salt AZOBR_RS23485 peptidase M3 +1.0  
D-Gluconic Acid sodium salt AZOBR_RS26460 hypothetical protein -1.3  
Ethanol AZOBR_RS07530 pyrroloquinoline quinone biosynthesis protein PqqE -1.9 Yes
Ethanol AZOBR_RS07540 pyrroloquinoline quinone biosynthesis protein PqqC -1.7 Yes
Ethanol AZOBR_RS10600 peptidase C69 -1.8  
Ethanol AZOBR_RS11930 modulator protein -1.7  
Ethanol AZOBR_RS12815 cytochrome C -1.2  
Glycerol AZOBR_RS00885 regulator +2.1  
Glycerol AZOBR_RS03325 hypothetical protein +1.5  
Glycerol AZOBR_RS03340 membrane protein +2.0  
Glycerol AZOBR_RS03360 glycosyl transferase family 1 +1.3  
Glycerol AZOBR_RS03390 protein tyrosine kinase +1.5  
Glycerol AZOBR_RS10275 hypothetical protein +2.4  
Glycerol AZOBR_RS10570 cytochrome B562 +1.0  
Glycerol AZOBR_RS11690 hypothetical protein +1.2  
Glycerol AZOBR_RS12505 hypothetical protein +1.5  
Glycerol AZOBR_RS17210 epimerase -1.9  
Glycerol AZOBR_RS18690 quinolinate synthetase +2.1  
Glycerol AZOBR_RS19355 glycosyl transferase family 1 -1.6  
Glycerol AZOBR_RS19360 glycosyltransferase family 1 +2.9  
Glycerol AZOBR_RS19390 methyltransferase -1.7  
Glycerol AZOBR_RS19395 glycosyl hydrolase -1.7  
Glycerol AZOBR_RS21875 histidine kinase +1.1  
Glycerol AZOBR_RS23660 hypothetical protein -1.5  
Glycerol AZOBR_RS23675 hypothetical protein -1.9  
Glycerol AZOBR_RS24040 FAD-dependent oxidoreductase +1.0  
Glycerol AZOBR_RS26780 hypothetical protein +1.8  
Glycerol AZOBR_RS29395 transcriptional regulator TrmB +2.2  
Glycerol AZOBR_RS32735 hypothetical protein +1.0  
L-Glutamine AZOBR_RS14140 membrane protein +1.1  
L-Glutamine AZOBR_RS14145 glycosyl transferase family protein +1.1  
L-Glutamine AZOBR_RS14690 C4-dicarboxylate ABC transporter substrate-binding protein -1.8  
L-Glutamine AZOBR_RS14700 C4-dicarboxylate ABC transporter permease -1.2  
L-Glutamine AZOBR_RS16430 MarR family transcriptional regulator +2.4  
L-Leucine AZOBR_RS01140 NADP-dependent malic enzyme -1.1  
L-Leucine AZOBR_RS06555 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) -1.9  
L-Leucine AZOBR_RS11930 modulator protein -1.5  
L-Leucine AZOBR_RS14110 pyridoxamine kinase -2.6  
L-Leucine AZOBR_RS16660 ABC transporter permease -1.5  
L-Leucine AZOBR_RS19395 glycosyl hydrolase -1.0  
L-Leucine AZOBR_RS30515 phosphoenolpyruvate carboxykinase +2.0  
L-Malic acid disodium salt monohydrate AZOBR_RS21135 histidine kinase -2.1 Yes
L-Proline AZOBR_RS08260 L-proline and D-alanine ABC transporter, substrate-binding component (from data) -1.4 Yes
L-Proline AZOBR_RS08655 amino acid ABC transporter substrate-binding protein -2.5  
L-Proline AZOBR_RS08665 amino acid ABC transporter permease -1.7  
L-Proline AZOBR_RS22355 acetyl-CoA synthetase -1.4  
L-Proline AZOBR_RS23685 AsnC family transcriptional regulator -4.0 Yes
L-Proline AZOBR_RS23695 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) -4.5 Yes
Sodium L-Lactate AZOBR_RS25110 (Fe-S)-binding protein -5.2 Yes
Sodium L-Lactate AZOBR_RS25115 Fe-S oxidoreductase -5.0 Yes
Sodium butyrate AZOBR_RS05755 Butyryl-CoA dehydrogenase (EC 1.3.8.1) (from data) -3.3 Yes
Sodium pyruvate AZOBR_RS02935 small component of pyruvate transporter (yjcH-like) (from data) -3.8 Yes
Sodium pyruvate AZOBR_RS02940 large component of pyruvate transporter (actP-like) (from data) -3.7 Yes
Sodium pyruvate AZOBR_RS14200 chemotaxis protein CheY -3.2  
Sodium pyruvate AZOBR_RS14205 exonuclease -3.0  
Sodium succinate dibasic hexahydrate AZOBR_RS21135 histidine kinase -3.4 Yes
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS04255 hypothetical protein -1.7  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS07605 regulator -1.9  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS10570 cytochrome B562 +1.1  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS10760 chemotaxis protein -1.9  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS10765 histidine kinase -1.4  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS22375 malonyl-CoA synthase -2.5 Yes
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS25765 hypothetical protein +1.1  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS26780 hypothetical protein +1.5  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS30850 hypothetical protein -1.9  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS30860 sensor histidine kinase -2.7  
a-Ketoglutaric acid disodium salt hydrate AZOBR_RS33805 hypothetical protein -2.6