Specific Phenotypes for Rhodospirillum rubrum S1H in carbon source experiments

Condition Gene Description Fitness Cons.
Hexanoic acid Rru_A2025 Transcriptional activator, TenA family (NCBI) -1.5  
Hexanoic acid Rru_A3063 Crotonyl-CoA reductase (NCBI) -1.2  
Hexanoic acid Rru_A3777 hypothetical protein (NCBI) -1.1  
Succinic Acid Rru_A0134 Succinic semialdehyde dehydrogenase (NCBI) -1.6  
Succinic Acid Rru_A0246 Ppx/GppA phosphatase (NCBI) +2.1  
Succinic Acid Rru_A0280 Queuine tRNA-ribosyltransferase (NCBI) -1.5  
Succinic Acid Rru_A0634 Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) -1.2  
Succinic Acid Rru_A0679 Transcriptional Regulator, TetR family (NCBI) +2.2  
Succinic Acid Rru_A0721 Anti-Sigm factor, ChrR (NCBI) -2.6  
Succinic Acid Rru_A0890 Integral membrane protein TerC (NCBI) -2.5  
Succinic Acid Rru_A0960 AmpD (negative regulator of AmpC) (NCBI) -2.0  
Succinic Acid Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) -2.3  
Succinic Acid Rru_A1018 extracellular solute-binding protein, family 1 (NCBI) -3.0  
Succinic Acid Rru_A1027 (Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (NCBI) -2.9  
Succinic Acid Rru_A1302 Formiminoglutamate deiminase (NCBI) -2.0  
Succinic Acid Rru_A1313 Membrane protein involved in aromatic hydrocarbon degradation (NCBI) +1.8  
Succinic Acid Rru_A1315 Sterol-binding (NCBI) +1.8  
Succinic Acid Rru_A1340 Glycerone kinase (NCBI) -1.0  
Succinic Acid Rru_A1381 Short chain fatty acid transporter (NCBI) -2.0  
Succinic Acid Rru_A1384 Multi-sensor Signal Transduction Histidine Kinase (NCBI) -1.9  
Succinic Acid Rru_A1398 Response regulator receiver domain protein (CheY) (NCBI) +1.4  
Succinic Acid Rru_A1401 chemotaxis sensory transducer (NCBI) +1.5  
Succinic Acid Rru_A1613 Cystathionine beta-lyase (NCBI) -1.9  
Succinic Acid Rru_A1726 Transcription-repair coupling factor (NCBI) -1.5  
Succinic Acid Rru_A1748 ABC transporter component (NCBI) -2.1  
Succinic Acid Rru_A1749 ABC transporter component (NCBI) -1.8  
Succinic Acid Rru_A1809 Sigma-24 (FecI) (NCBI) +2.2  
Succinic Acid Rru_A2155 MotA/TolQ/ExbB proton channel (NCBI) -2.4  
Succinic Acid Rru_A2191 AMP-dependent synthetase and ligase (NCBI) +1.0  
Succinic Acid Rru_A2213 sulfotransferase (NCBI) +1.8  
Succinic Acid Rru_A2231 Glycosyl transferase, family 25 (NCBI) -1.5  
Succinic Acid Rru_A2297 Ribokinase (NCBI) +1.9  
Succinic Acid Rru_A2300 inner-membrane translocator (NCBI) +1.6  
Succinic Acid Rru_A2302 Periplasmic binding protein/LacI transcriptional regulator (NCBI) +1.4  
Succinic Acid Rru_A2356 extracellular solute-binding protein, family 5 (NCBI) +1.4  
Succinic Acid Rru_A2362 Protein-methionine-S-oxide reductase (NCBI) -1.5  
Succinic Acid Rru_A2721 2-oxoglutarate synthase, alpha subunit (NCBI) -1.9  
Succinic Acid Rru_A2722 2-oxoglutarate synthase, beta subunit (NCBI) -2.2  
Succinic Acid Rru_A2767 ribonuclease G (RNase G) (NCBI) +1.5  
Succinic Acid Rru_A2781 Protein of unknown function UPF0261 (NCBI) -1.6  
Succinic Acid Rru_A2789 Major facilitator superfamily protein MFS_1 (NCBI) +2.2  
Succinic Acid Rru_A2858 Flagellin-like (NCBI) -1.5  
Succinic Acid Rru_A2970 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (NCBI) -1.3  
Succinic Acid Rru_A2984 CrtD protein (NCBI) -1.5  
Succinic Acid Rru_A3000 Formate acetyltransferase (NCBI) -1.4  
Succinic Acid Rru_A3575 Acetate--CoA ligase (NCBI) -1.9  
Succinic Acid Rru_A3676 TRAP dicarboxylate transporter, DctM subunit (NCBI) +2.1  
Succinic Acid Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) +2.7