Specific Phenotypes for Ralstonia solanacearum GMI1000 in carbon source experiments

Condition Gene Description Fitness Cons.
D-Galactose RS_RS13765 D-galactonate dehydratase -5.0 Yes
D-Galactose RS_RS13775 short-chain dehydrogenase -4.6 Yes
D-Galactose RS_RS13785 SMP-30/gluconolactonase/LRE family protein -4.9 Yes
D-Galactose RS_RS13795 arabinose import ATP-binding protein AraG -6.4 Yes
D-Galactose RS_RS13800 arabinose ABC transporter substrate-binding protein -4.8 Yes
D-Galactose RS_RS13810 porin -5.0 Yes
D-Galactose RS_RS23855 TetR/AcrR family transcriptional regulator +1.6  
D-Galactose RS_RS24960 NAD(P)-dependent oxidoreductase -2.0  
D-Glucose RS_RS00245 6-phosphogluconolactonase -2.1 Yes
D-Glucose RS_RS24605 glucokinase -2.1  
D-Glucose RS_RS24940 porin -3.1  
D-Glucose RS_RS24945 D-xylose ABC transporter substrate-binding protein -4.4 Yes
D-Glucose RS_RS24950 D-xylose ABC transporter ATP-binding protein -4.0 Yes
D-Glucose RS_RS24960 NAD(P)-dependent oxidoreductase -5.5  
L-Alanine RS_RS04610 AsnC family transcriptional regulator -5.5 Yes
L-Alanine RS_RS11355 D-amino acid dehydrogenase small subunit -2.1  
L-Aspartic Acid RS_RS00640 HPP family protein +1.6  
L-Aspartic Acid RS_RS09840 dicarboxylate/amino acid:cation symporter -2.0 Yes
L-Aspartic Acid RS_RS13345 LysR family transcriptional regulator variable  
L-Aspartic Acid RS_RS20550 D-amino-acid transaminase -1.2  
L-Glutamic acid monopotassium salt monohydrate RS_RS10395 2-isopropylmalate synthase -2.4  
L-Glutamic acid monopotassium salt monohydrate RS_RS18125 acyl-CoA thioesterase -3.0  
L-Glutamine RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase -1.1  
L-Glutamine RS_RS18125 acyl-CoA thioesterase -1.4  
Sodium pyruvate RS_RS00100 DNA-binding response regulator -3.3 Yes
Sodium pyruvate RS_RS00105 sensor histidine kinase -3.0 Yes
Sodium pyruvate RS_RS00110 carbon starvation protein A -3.8 Yes
Sodium pyruvate RS_RS00115 DUF466 domain-containing protein -3.5 Yes
Sodium pyruvate RS_RS00235 GTP-binding protein -1.5 Yes
Sodium succinate dibasic hexahydrate RS_RS01625 C4-dicarboxylate transporter 1 -2.4 Yes
Sodium succinate dibasic hexahydrate RS_RS01630 sensor histidine kinase -2.3 Yes
Sucrose RS_RS00125 hypothetical protein +1.5  
Sucrose RS_RS01790 cytochrome c oxidase subunit I -1.6  
Sucrose RS_RS07315 ABC-F family ATPase -1.6 Yes
Sucrose RS_RS14315 1-phosphofructokinase -3.7  
Sucrose RS_RS23325 carbohydrate kinase -3.4  
Sucrose RS_RS23340 maltoporin -3.4