Specific Phenotypes for Mycobacterium tuberculosis H37Rv in carbon source experiments

Condition	Gene	Description	Fitness	Cons.
D,L-Malic Acid	Rv3667	Acetyl-coenzyme A synthetase Acs (acetate--CoA ligase) (acetyl-CoA synthetase) (acetyl-CoA synthase) (acyl-activating enzyme) (acetate thiokinase) (acetyl-activating enzyme) (acetate--coenzyme A ligase) (acetyl-coenzyme A synthase)	-1.5
D-Trehalose dihydrate	Rv1236	Probable sugar-transport integral membrane protein ABC transporter SugA	-1.8	Yes
D-Trehalose dihydrate	Rv1238	Probable sugar-transport ATP-binding protein ABC transporter SugC	-1.6	Yes
Glycerol	Rv3499c	Mce-family protein Mce4A	-1.4
Glycerol	Rv3501c	Conserved integral membrane protein YrbE4A. Possible ABC transporter.	-1.6
L-Asparagine	Rv0530A	Conserved protein	+1.5
L-Asparagine	Rv1180	Probable polyketide beta-ketoacyl synthase Pks3	+1.4
L-Asparagine	Rv2618	Conserved hypothetical protein	-1.4
L-Asparagine	Rv3145	Probable NADH dehydrogenase I (chain A) NuoA (NADH-ubiquinone oxidoreductase chain A)	-1.7
L-Asparagine	Rv3146	Probable NADH dehydrogenase I (chain B) NuoB (NADH-ubiquinone oxidoreductase chain B)	-1.4
L-Asparagine	Rv3149	Probable NADH dehydrogenase I (chain E) NuoE (NADH-ubiquinone oxidoreductase chain E)	-1.5
L-Asparagine	Rv3150	Probable NADH dehydrogenase I (chain F) NuoF (NADH-ubiquinone oxidoreductase chain F)	-1.5
L-Asparagine	Rv3151	Probable NADH dehydrogenase I (chain G) NuoG (NADH-ubiquinone oxidoreductase chain G)	-1.5
L-Asparagine	Rv3152	Probable NADH dehydrogenase I (chain H) NuoH (NADH-ubiquinone oxidoreductase chain H)	-1.2
L-Asparagine	Rv3154	Probable NADH dehydrogenase I (chain J) NuoJ (NADH-ubiquinone oxidoreductase chain J)	-1.3
L-Asparagine	Rv3156	Probable NADH dehydrogenase I (chain L) NuoL (NADH-ubiquinone oxidoreductase chain L)	-1.4
L-Asparagine	Rv3157	Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M)	-1.6
L-Asparagine	Rv3158	Probable NADH dehydrogenase I (chain N) NuoN (NADH-ubiquinone oxidoreductase chain N)	-1.5
L-Asparagine	Rv3342	Possible methyltransferase (methylase)	-1.6
Potassium acetate	Rv0408	Probable phosphate acetyltransferase Pta (phosphotransacetylase)	-3.2	Yes
Potassium acetate	Rv3342	Possible methyltransferase (methylase)	-1.5
Sodium D-Lactate	Rv0487	Conserved hypothetical protein	-2.3
Sodium D-Lactate	Rv1257c	Probable oxidoreductase	-3.0	Yes
Sodium L-Lactate	Rv1872c	Possible L-lactate dehydrogenase (cytochrome) LldD2	-2.5	Yes
Sodium butyrate	Rv2851c	GCN5-related N-acetyltransferase	-1.6
Sodium butyrate	Rv3575c	Transcriptional regulatory protein (probably LacI-family)	-1.6
Sodium propionate	Rv0408	Probable phosphate acetyltransferase Pta (phosphotransacetylase)	-2.0	Yes
Sodium propionate	Rv1058	Probable medium chain fatty-acid-CoA ligase FadD14 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase)	-1.4
Sodium propionate	Rv1183	Probable conserved transmembrane transport protein MmpL10	-1.2
Sodium propionate	Rv1193	Probable fatty-acid-CoA ligase FadD36 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase)	-2.3
Sodium propionate	Rv3145	Probable NADH dehydrogenase I (chain A) NuoA (NADH-ubiquinone oxidoreductase chain A)	-2.8
Sodium propionate	Rv3146	Probable NADH dehydrogenase I (chain B) NuoB (NADH-ubiquinone oxidoreductase chain B)	-2.4
Sodium propionate	Rv3147	Probable NADH dehydrogenase I (chain C) NuoC (NADH-ubiquinone oxidoreductase chain C)	-2.7
Sodium propionate	Rv3148	Probable NADH dehydrogenase I (chain D) NuoD (NADH-ubiquinone oxidoreductase chain D)	-2.9
Sodium propionate	Rv3149	Probable NADH dehydrogenase I (chain E) NuoE (NADH-ubiquinone oxidoreductase chain E)	-2.6
Sodium propionate	Rv3150	Probable NADH dehydrogenase I (chain F) NuoF (NADH-ubiquinone oxidoreductase chain F)	-3.0
Sodium propionate	Rv3151	Probable NADH dehydrogenase I (chain G) NuoG (NADH-ubiquinone oxidoreductase chain G)	-2.2
Sodium propionate	Rv3152	Probable NADH dehydrogenase I (chain H) NuoH (NADH-ubiquinone oxidoreductase chain H)	-2.6
Sodium propionate	Rv3153	Probable NADH dehydrogenase I (chain I) NuoI (NADH-ubiquinone oxidoreductase chain I)	-2.2
Sodium propionate	Rv3154	Probable NADH dehydrogenase I (chain J) NuoJ (NADH-ubiquinone oxidoreductase chain J)	-2.6
Sodium propionate	Rv3156	Probable NADH dehydrogenase I (chain L) NuoL (NADH-ubiquinone oxidoreductase chain L)	-2.7
Sodium propionate	Rv3157	Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M)	-2.6
Sodium propionate	Rv3158	Probable NADH dehydrogenase I (chain N) NuoN (NADH-ubiquinone oxidoreductase chain N)	-2.2
Sodium propionate	Rv3575c	Transcriptional regulatory protein (probably LacI-family)	-1.3
Stearic acid	Rv3766	Hypothetical protein	-2.6
Valeric acid	Rv3151	Probable NADH dehydrogenase I (chain G) NuoG (NADH-ubiquinone oxidoreductase chain G)	-1.3
heptadecanoic acid	Rv0171	Mce-family protein Mce1C	-1.5
heptadecanoic acid	Rv3484	Possible conserved protein CpsA	-1.4
heptadecanoic acid	Rv3766	Hypothetical protein	-2.4