| Condition | Gene | Description | Fitness | Cons. |
|---|
| D-Cellobiose | Ga0059261_1166 | Beta-glucosidase (EC 3.2.1.21) (from data) | -2.6 | Yes |
| D-Cellobiose | Ga0059261_2678 | DNA-binding ferritin-like protein (oxidative damage protectant) | variable | |
| D-Cellobiose | Ga0059261_3988 | Methylmalonyl-CoA mutase, N-terminal domain/subunit | -1.0 | |
| D-Fructose | Ga0059261_1776 | Fructokinase (EC 2.7.1.4) (from data) | -5.4 | |
| D-Fructose | Ga0059261_1777 | D-fructose transporter, sugar porter family (from data) | -4.7 | Yes |
| D-Glucose | Ga0059261_2678 | DNA-binding ferritin-like protein (oxidative damage protectant) | -3.5 | |
| D-Maltose monohydrate | Ga0059261_1581 | Maltose or maltodextrin glucosidase (EC 3.2.1.20) (from data) | -3.2 | |
| D-Maltose monohydrate | Ga0059261_1582 | Tryptophan halogenase | -2.6 | |
| D-Maltose monohydrate | Ga0059261_1583 | TonB-dependent receptor | -1.5 | |
| D-Maltose monohydrate | Ga0059261_1584 | transcriptional regulator, LacI family | -1.8 | Yes |
| D-Maltose monohydrate | Ga0059261_1585 | Major Facilitator Superfamily | -2.1 | Yes |
| D-Maltose monohydrate | Ga0059261_3403 | Uncharacterized protein conserved in bacteria | +1.6 | |
| D-Maltose monohydrate | Ga0059261_3926 | L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) | +1.9 | |
| D-Maltose monohydrate | Ga0059261_3969 | Serine hydrolase | -2.6 | |
| D-Raffinose pentahydrate | Ga0059261_0549 | Domain of Unknown Function (DUF1080) | -1.1 | Yes |
| D-Raffinose pentahydrate | Ga0059261_0553 | Sugar phosphate isomerases/epimerases | -1.1 | |
| D-Raffinose pentahydrate | Ga0059261_1776 | Fructokinase (EC 2.7.1.4) (from data) | -5.1 | |
| D-Raffinose pentahydrate | Ga0059261_1777 | D-fructose transporter, sugar porter family (from data) | -5.0 | |
| D-Raffinose pentahydrate | Ga0059261_1778 | beta-fructosidase for D-raffinose catabolism (EC 3.2.1.26) (from data) | -5.0 | Yes |
| D-Raffinose pentahydrate | Ga0059261_3256 | glycine cleavage system T protein | -1.7 | |
| D-Raffinose pentahydrate | Ga0059261_3257 | glycine cleavage system H protein | -1.6 | |
| D-Raffinose pentahydrate | Ga0059261_3258 | Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain | -1.5 | |
| D-Raffinose pentahydrate | Ga0059261_3259 | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain | -1.4 | |
| D-Raffinose pentahydrate | Ga0059261_3277 | polyhydroxyalkanoate depolymerase, intracellular | -1.6 | |
| D-Xylose | Ga0059261_1313 | acetyl-coenzyme A synthetase (EC 6.2.1.1) | -1.5 | |
| D-Xylose | Ga0059261_1893 | Xylonolactonase (EC 3.1.1.68) (from data) | -4.2 | Yes |
| D-Xylose | Ga0059261_1894 | D-xylose 1-dehydrogenase (EC 1.1.1.175) (from data) | -5.4 | Yes |
| D-Xylose | Ga0059261_1895 | 2-keto-3-deoxyxylonate dehydratase (EC 4.2.1.141) (from data) | -4.1 | Yes |
| D-Xylose | Ga0059261_1896 | Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) | -4.3 | Yes |
| D-Xylose | Ga0059261_2649 | Dihydroxyacid dehydratase/phosphogluconate dehydratase | -4.5 | Yes |
| D-Xylose | Ga0059261_2662 | Transcriptional regulators | -1.2 | |
| L-Glutamic acid monopotassium salt monohydrate | Ga0059261_2678 | DNA-binding ferritin-like protein (oxidative damage protectant) | -5.7 | |
| L-Glutamine | Ga0059261_0324 | Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit | -1.5 | |
| L-Glutamine | Ga0059261_0325 | 2-oxoacid:acceptor oxidoreductase, alpha subunit | -1.7 | |
| L-Glutamine | Ga0059261_1066 | hypothetical protein | -1.3 | |
| L-Glutamine | Ga0059261_1504 | Uncharacterized protein conserved in bacteria | -1.6 | |
| L-Glutamine | Ga0059261_3327 | hypothetical protein | -1.4 | |
| L-Glutamine | Ga0059261_3328 | Uncharacterized iron-regulated membrane protein | -1.5 | |
| N-Acetyl-D-Glucosamine | Ga0059261_1644 | Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) | -5.8 | Yes |
| N-Acetyl-D-Glucosamine | Ga0059261_1645 | N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) | -5.4 | Yes |
| N-Acetyl-D-Glucosamine | Ga0059261_1646 | Phosphocarrier protein HPr/phosphoenolpyruvate--protein phosphotransferase (EC 2.7.3.9)/PTS system IIA component, Glc family (TC 4.A.1) | -5.4 | Yes |
| N-Acetyl-D-Glucosamine | Ga0059261_1647 | N-acetylglucosamine phosphotransferase system, IIB/IIC components (EC 2.7.1.193) (from data) | -5.6 | Yes |
| N-Acetyl-D-Glucosamine | Ga0059261_1887 | cation diffusion facilitator family transporter | -2.1 | |
| N-Acetyl-D-Glucosamine | Ga0059261_3256 | glycine cleavage system T protein | -1.7 | |
| N-Acetyl-D-Glucosamine | Ga0059261_3257 | glycine cleavage system H protein | -2.0 | |
| N-Acetyl-D-Glucosamine | Ga0059261_3265 | Glycerol-3-phosphate dehydrogenase | -2.8 | |
| N-Acetyl-D-Glucosamine | Ga0059261_3277 | polyhydroxyalkanoate depolymerase, intracellular | -1.6 | |
| a-Cyclodextrin | Ga0059261_0549 | Domain of Unknown Function (DUF1080) | -1.1 | |
| a-Cyclodextrin | Ga0059261_0553 | Sugar phosphate isomerases/epimerases | -1.2 | |
| a-Cyclodextrin | Ga0059261_1580 | Glycosidases | -1.3 | Yes |
| a-Cyclodextrin | Ga0059261_1581 | Maltose or maltodextrin glucosidase (EC 3.2.1.20) (from data) | -5.4 | Yes |
| a-Cyclodextrin | Ga0059261_1582 | Tryptophan halogenase | -4.1 | |
| a-Cyclodextrin | Ga0059261_1583 | TonB-dependent receptor | -5.0 | |
| a-Cyclodextrin | Ga0059261_1584 | transcriptional regulator, LacI family | -5.3 | Yes |
| a-Cyclodextrin | Ga0059261_1585 | Major Facilitator Superfamily | -5.4 | Yes |
| a-Cyclodextrin | Ga0059261_3256 | glycine cleavage system T protein | -1.8 | |
| a-Cyclodextrin | Ga0059261_3257 | glycine cleavage system H protein | -2.0 | |
| a-Cyclodextrin | Ga0059261_3258 | Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain | -1.7 | |
| a-Cyclodextrin | Ga0059261_3259 | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain | -2.0 | |
| a-Cyclodextrin | Ga0059261_3277 | polyhydroxyalkanoate depolymerase, intracellular | -2.0 | |
| a-Cyclodextrin | Ga0059261_3494 | Glutamine synthetase adenylyltransferase | -1.5 | |
| a-Cyclodextrin | Ga0059261_3926 | L-proline dehydrogenase (EC 1.5.99.8)/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) | +1.6 | |
| a-Cyclodextrin | Ga0059261_3969 | Serine hydrolase | -1.6 | |
| casamino acids | Ga0059261_3993 | Acetyl/propionyl-CoA carboxylase, alpha subunit | +1.0 | |