Fitness data for Xcc-8004.898.1 in Xanthomonas campestris pv. campestris strain 8004

putative; ORF located using Glimmer/Genemark
SEED: putative; ORF located using Glimmer/Genemark

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta xylem Xylemvessel barcodes T0L1P4 -3.0 -2.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.6 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -1.0 -2.0 compare
moka MOKA -1.0 -2.4 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -1.0 -1.8 compare
in planta xylem Xylemvessel barcodes T0L2P4 -0.9 -1.2 compare
control PBS control -0.9 -1.8 compare
carbon source D-Glucose 16.67 mM (C) -0.8 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -0.9 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH -0.7 -1.6 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x -0.7 -1.5 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.7 +1.5 compare
clovis xylem sap Clovis xylem sap +0.8 +1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.8 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.8 +1.5 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.9 +2.1 compare