Fitness data for Xcc-8004.892.1 in Xanthomonas campestris pv. campestris strain 8004

Coupling protein VirD4, ATPase required for T-DNA transfer
SEED: Coupling protein VirD4, ATPase required for T-DNA transfer
KEGG: type IV secretion system protein VirD4

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -2.3 -2.8 compare
in planta xylem Xylemvessel barcodes T0L1P3 -2.1 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -3.2 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.8 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.8 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.7 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.8 -1.5 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -0.8 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.0 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.7 -1.0 compare
r2a control R2A control -0.7 -2.2 compare
in planta xylem Xylemvessel barcodes T1L3P4 -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.6 -1.4 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.5 -1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.2 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.8 +1.8 compare