Fitness data for Xcc-8004.715.1 in Xanthomonas campestris pv. campestris strain 8004

RNA polymerase sigma factor
SEED: RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -1.9 -2.9 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) -1.6 -2.6 compare
in planta xylem Xylemvessel barcodes T0L1P4 -1.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.0 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.7 -2.0 compare
control PBS control -0.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -2.0 compare
xantho_mme_glucose_casamino Xantho_MME_glucose_casamino -0.6 -2.1 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -0.6 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.4 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.6 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -0.9 compare
carbon source Pectin from apple 2 g/L (C) +0.6 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.7 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.5 compare
in planta xylem Xylemvessel barcodes T0L1P3 +1.1 +1.2 compare