Fitness data for Xcc-8004.4255.1 in Xanthomonas campestris pv. campestris strain 8004

Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
SEED: Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
KEGG: protocatechuate 4,5-dioxygenase, beta chain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 208 hydathodes and pooled together) -1.3 -3.2 compare
r2a control R2A control -1.2 -2.2 compare
in planta xylem Xylemvessel barcodes T0L2P4 -0.9 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.3 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.7 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -2.0 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.7 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.5 -1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.3 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) and Pseudomonas fluorescens CFPB 13502 grown in 0.1x TSB, 0.4x +0.4 +1.0 compare
supernatant Supernatant; Xanthomonas campestris pv. campestris (strain 8004) grown in 0.1x TSB, 0.4x +0.6 +2.4 compare
carbon source Citric Acid 16.67 mM (C) +0.9 +2.0 compare
in planta xylem Xylemvessel barcodes T0L1P3 +1.0 +1.9 compare