Fitness data for Xcc-8004.400.1 in Xanthomonas campestris pv. campestris strain 8004

Transcriptional activator MetR
SEED: Transcriptional activator MetR
KEGG: LysR family transcriptional regulator, regulator for metE and metH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Fructose 16.67 mM (C) -3.2 -9.0 compare
carbon source D-Glucose 16.67 mM (C) -3.1 -9.0 compare
carbon source Citric Acid 16.67 mM (C) -2.7 -8.0 compare
carbon source Citric Acid 10mM (C) -2.2 -7.3 compare
carbon source Pectin from apple 2 g/L (C) -2.2 -7.6 compare
clovis xylem sap Clovis xylem sap -1.1 -5.1 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.7 -2.3 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.6 -2.0 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.5 -1.9 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) -0.5 -2.1 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -0.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
clovis xylem sap Clovis xylem sap -0.4 -2.3 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.4 -1.9 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
in planta 1648 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.3 +1.0 compare
in planta xylem Xylemvessel barcodes T0L1P3 +0.3 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare