Fitness data for Xcc-8004.3721.1 in Xanthomonas campestris pv. campestris strain 8004

Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
SEED: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
KEGG: type III secretion protein SctT

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -5.1 -2.4 compare
carbon source Citric Acid 10mM (C) -4.0 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.6 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.5 -2.4 compare
carbon source Citric Acid 16.67 mM (C) -2.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.3 -2.3 compare
carbon source Pectin from apple 2 g/L (C) -2.1 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.9 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -1.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.6 -2.2 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) -1.6 -1.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.6 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3 -1.4 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +1.3 +1.3 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +1.6 +2.3 compare
in planta xylem Xylemvessel barcodes T0L1P4 +1.7 +1.5 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +2.0 +3.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.1 +2.0 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +2.6 +3.1 compare