Fitness data for Xcc-8004.2247.1 in Xanthomonas campestris pv. campestris strain 8004

ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
KEGG: DNA ligase (ATP)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.1)


Add gene:

Or see all 98 experiments or choose conditions

group condition fitness t score  
in planta xylem Xylemvessel barcodes T0L2P4 -0.3 -1.8 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days -0.2 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -1.3 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) -0.2 -1.2 compare
carbon source Citric Acid 10mM (C) -0.1 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.9 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.1 +1.0 compare
in planta xylem Xylemvessel barcodes Location 3 6 dpi (25 plantes) +0.1 +0.9 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH +0.1 +1.1 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.1 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +1.0 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.1 +1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.1 +1.2 compare
control PBS control +0.2 +1.4 compare
xantho_mme_glucose_dropout_lth Xantho_MME_glucose_dropout_LTH +0.2 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +1.3 compare
r2a control R2A control +0.3 +2.4 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.3 +2.3 compare