Fitness data for Xcc-8004.2020.1 in Xanthomonas campestris pv. campestris strain 8004

Type IV fimbrial biogenesis protein FimT
SEED: Type IV fimbrial biogenesis protein FimT
KEGG: type IV fimbrial biogenesis protein FimT

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.7 -2.8 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=3_days -0.5 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X +0.3 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.5 compare
in planta xylem Xylemvessel barcodes Location 2 6 dpi (25 plantes) +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
in planta mesophyll Plant=Cauliflower; Treatment=None; Sample=Mesophyll; Collection=Direct; Time=2_days +0.3 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.3 compare
in planta xylem Xylemvessel barcodes Location 2 4 dpi (25 plantes) +0.3 +2.0 compare
in planta xylem Xylemvessel barcodes Location 3 4 dpi (25 plantes) +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.9 compare
in planta 1664 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.4 +2.4 compare
carbon source Citric Acid 16.67 mM (C) +0.5 +2.8 compare
in planta 1600 hydathodes 6 dpi (Dna extract from 8 * 200 hydathodes and pooled together) +0.6 +3.9 compare