Fitness data for SMc02785 in Sinorhizobium meliloti 1021

lytic murein transglycosylase A protein
SEED: Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-)
KEGG: membrane-bound lytic murein transglycosylase A

All 243 fitness values, sorted by group and condition


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.7 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.1 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 -0.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.2 compare
Parafilmed volatile agar plate with no fungus -0.3 -1.3 compare
Parafilmed volatile agar plate with no fungus -0.3 -1.5 compare
Parafilmed volatile agar plate with no fungus -0.8 -1.7 compare
Parafilmed volatile agar plate with no fungus -0.5 -2.0 compare
Parafilmed volatile agar plate with no fungus -0.8 -1.7 compare
carbon source 5-Aminovaleric (C) -0.3 -1.4 compare
5-Aminovaleric (C) -0.3 -1.0 compare
Beta-Lactose (C) -0.3 -1.5 compare
Beta-Lactose (C) -0.4 -1.7 compare
Beta-Lactose (C) -0.1 -0.3 compare
D-Tagatose (C) -0.2 -1.0 compare
D-Arabinose (C) -0.4 -2.3 compare
D-Cellobiose (C) -0.3 -1.1 compare
D-Fructose (C) -0.1 -0.6 compare
D-Galactose (C) -0.3 -1.7 compare
D-Glucosamine Hydrochloride (C) -0.4 -1.8 compare
D-Glucose (C) -0.2 -1.0 compare
D-Glucose (C) +0.1 +0.5 compare
D-Glucose (C) +0.0 +0.0 compare
D-Glucose (C) +0.2 +0.9 compare
D-Glucose (C) +0.0 +0.2 compare
D-Glucose (C) -0.4 -2.6 compare
D-Glucose (C) -0.2 -1.4 compare
D-Leucrose (C) -0.1 -0.6 compare
D-Leucrose (C) +0.0 +0.1 compare
D-Maltose (C) -0.3 -1.7 compare
D-Mannitol (C) -0.1 -0.7 compare
D-Mannitol (C) -0.1 -0.6 compare
D-Mannose (C) -0.3 -1.3 compare
D-Mannose (C) -0.3 -1.4 compare
D-Mannose (C) -0.2 -1.1 compare
D-Raffinose (C) -0.2 -1.3 compare
D-Ribose (C) -0.5 -2.6 compare
D-Ribose (C) -0.1 -0.4 compare
D-Ribose (C) -0.5 -2.4 compare
D-Salicin (C) -0.5 -2.0 compare
D-Sorbitol (C) +0.2 +1.1 compare
D-Trehalose (C) -0.2 -1.3 compare
D-Trehalose (C) -0.2 -1.2 compare
D-Trehalose (C) -0.2 -0.9 compare
D-Xylose (C) -0.1 -0.5 compare
D-Xylose (C) +0.1 +0.4 compare
D-Xylose (C) -0.2 -1.5 compare
Glycerol (C) -0.2 -1.5 compare
L-Alanine (C) +0.1 +0.7 compare
L-Alanine (C) -0.0 -0.1 compare
L-Arabinose (C) +0.1 +0.5 compare
L-Arabinose (C) -0.0 -0.0 compare
L-Arabinose (C) -0.3 -1.1 compare
L-Fucose (C) +0.0 +0.1 compare
L-Glutamine (C) -0.1 -0.2 compare
L-Histidine (C) -0.1 -0.8 compare
L-Leucine (C) -0.1 -0.7 compare
L-Lysine (C) -0.0 -0.0 compare
L-Lysine (C) +0.1 +0.6 compare
L-Lysine (C) +0.0 +0.1 compare
L-Malic (C) -0.2 -1.4 compare
pipercolic (C) -0.1 -0.4 compare
pipercolic (C) -0.0 -0.2 compare
L-Proline (C) +0.0 +0.1 compare
L-Rhamnose (C) -0.1 -0.5 compare
Lactitol (C) -0.2 -0.9 compare
Lactitol (C) -0.4 -1.8 compare
Lactulose (C) -0.2 -1.1 compare
Lactulose (C) -0.2 -1.0 compare
m-Inositol (C) +0.1 +0.7 compare
Maltitol (C) -0.1 -0.3 compare
Maltitol (C) +0.2 +1.1 compare
Mannobiose (C) -0.0 -0.1 compare
Mannobiose (C) -0.3 -1.5 compare
methyl 3-keto-a-D-glucopyranoside (C) -0.0 -0.1 compare
methyl 3-keto-a-D-glucopyranoside (C) +0.0 +0.1 compare
Methyl beta-D-glucopyranoside (C) -0.1 -0.5 compare
Methyl beta-D-glucopyranoside (C) -0.2 -1.0 compare
methyl-beta-D-xylopyranoside (C) -0.0 -0.3 compare
methyl-beta-D-xylopyranoside (C) -0.1 -0.4 compare
Myristic (C) -0.3 -1.5 compare
Myristic (C) -0.0 -0.1 compare
NAG (C) -0.1 -0.2 compare
palatinose (C) +0.1 +0.4 compare
palatinose (C) -0.1 -0.5 compare
acetate (C) -1.2 -4.5 compare
acetate (C) -0.9 -3.3 compare
Protocatechuic Acid (C) -0.1 -0.6 compare
Protocatechuic Acid (C) -0.0 -0.1 compare
D,L-Lactate (C) -0.2 -0.8 compare
Fumarate (C) +0.0 +0.1 compare
Fumarate (C) -0.1 -0.5 compare
L-Lactate (C) -0.2 -1.0 compare
pyruvate (C) +0.0 +0.0 compare
succinate (C) -0.3 -1.6 compare
succinate (C) -0.1 -0.7 compare
succinate (C) -0.3 -1.5 compare
Sucrose (C) -0.1 -0.5 compare
Sucrose (C) +0.0 +0.0 compare
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.2 +1.2 compare
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.1 +0.3 compare
Uridine (C) -0.3 -1.7 compare
Xylobiose (C) +0.0 +0.3 compare
Xylobiose (C) +0.1 +0.4 compare
dmso control DMSO control +0.0 +0.3 compare
DMSO control -0.1 -0.6 compare
DMSO control +0.0 +0.0 compare
DMSO control +0.1 +0.4 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.5 +1.3 compare
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.2 -0.8 compare
lb LB -0.5 -2.2 compare
LB -0.7 -3.1 compare
LB -0.6 -2.6 compare
LB -0.4 -1.8 compare
LB -0.5 -3.0 compare
lb no stress control LB no stress control +0.1 +0.8 compare
LB no stress control -0.2 -1.0 compare
LB no stress control -0.1 -0.6 compare
LB no stress control +0.1 +0.8 compare
nitrogen source Cytosine (N) -0.6 -1.8 compare
D-Glucosamine Hydrochloride (N) +0.0 +0.0 compare
Gelatin (N) -0.1 -0.4 compare
Gly-DL-Asp (N) +0.1 +0.4 compare
L-Arginine (N) -0.1 -0.2 compare
L-Asparagine (N) +0.5 +2.2 compare
L-Glutamine (N) -0.3 -1.6 compare
L-Histidine (N) -0.1 -0.3 compare
L-Leucine (N) -0.1 -0.3 compare
L-Serine (N) +0.2 +0.7 compare
NAG (N) +0.1 +0.4 compare
nitrate (N) +0.1 +0.5 compare
Uridine (N) +0.2 +0.6 compare
nutrient Min media with glucose +0.0 +0.2 compare
Min media with glucose -0.1 -0.6 compare
L-Histidine -0.2 -1.2 compare
L-Histidine -0.1 -0.7 compare
L-Lysine -0.1 -0.7 compare
L-Lysine -0.1 -0.2 compare
pH LB, pH6 -0.5 -2.4 compare
LB, pH6 -0.1 -0.6 compare
LB, pH7 -0.1 -0.9 compare
LB, pH7 -0.3 -1.8 compare
LB, pH8 -0.3 -1.8 compare
LB, pH8 +0.0 +0.2 compare
r2a control R2A control -0.1 -0.5 compare
R2A control -0.3 -1.6 compare
R2A control for volatile experiments -0.4 -1.8 compare
R2A control for volatile experiments -0.3 -1.2 compare
R2A control for volatile experiments -0.4 -2.2 compare
R2A control for volatile experiments +0.0 +0.1 compare
R2A control for volatile experiments -0.1 -0.7 compare
r2a-hepes control R2A-HEPES control for volatile experiments -0.1 -0.7 compare
R2A-HEPES control for volatile experiments -0.1 -0.5 compare
R2A-HEPES control for volatile experiments +0.0 +0.3 compare
R2A-HEPES control for volatile experiments -0.3 -1.7 compare
R2A-HEPES control for volatile experiments -0.3 -1.4 compare
R2A-HEPES control for volatile experiments -0.1 -0.5 compare
R2A-HEPES control for volatile experiments -0.2 -1.2 compare
R2A-HEPES control for volatile experiments -0.1 -0.7 compare
R2A-HEPES control for volatile experiments -0.1 -0.5 compare
R2A-HEPES control for volatile experiments -0.1 -0.6 compare
R2A-HEPES control for volatile experiments -0.1 -0.6 compare
R2A-HEPES control for volatile experiments -0.1 -0.5 compare
stress 1-octen-3-ol 0.4933903333 mM -0.1 -0.4 compare
1-octen-3-ol 0.4933903333 mM -0.1 -0.6 compare
1-octen-3-ol 0.4933903333 mM -0.2 -1.2 compare
1-octen-3-ol 0.5427293333 mM +0.0 +0.3 compare
1-octen-3-ol 0.5427293333 mM -0.1 -0.7 compare
1-octen-3-ol 0.5427293333 mM -0.1 -0.7 compare
1-octen-3-ol 0.5427293333 mM -0.1 -0.5 compare
1-octen-3-ol 0.6030326667 mM -0.1 -0.5 compare
1-octen-3-ol 0.6030326667 mM +0.1 +0.4 compare
1-octen-3-ol 0.6030326667 mM +0.1 +0.3 compare
3-octanone 0.456 mM -0.2 -1.0 compare
3-octanone 0.456 mM -0.1 -0.3 compare
3-octanone 0.456 mM -0.3 -1.7 compare
3-octanone 2.655166667 mM +0.1 +0.7 compare
3-octanone 2.655166667 mM +0.0 +0.3 compare
3-octanone 2.655166667 mM -0.1 -0.5 compare
3-octanone 2.655166667 mM -0.3 -1.5 compare
3-octanone 5.310333333 mM -0.2 -1.0 compare
3-octanone 5.310333333 mM -0.1 -0.3 compare
3-octanone 5.310333333 mM -0.2 -0.9 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.1 -0.5 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.2 -1.2 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.2 -0.9 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.1 -0.3 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.2 -0.9 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.0 -0.2 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.2 -0.9 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.1 -0.4 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.1 -0.5 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.1 -0.9 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.1 -0.9 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM +0.0 +0.1 compare
Aluminum chloride -0.4 -1.5 compare
Cisplatin 0.0005 mg/ml -0.3 -1.0 compare
Cisplatin 0.001 mg/ml -0.6 -2.1 compare
Cobalt chloride 0.16 mM -0.5 -2.6 compare
copper (II) chloride 1 mM -0.6 -3.4 compare
copper (II) chloride 1 mM -0.1 -0.4 compare
D-Cycloserine 0.05 mg/ml -0.7 -4.0 compare
Fusidic 0.0001 mg/ml -1.2 -5.2 compare
A22 0.02 mg/ml -0.6 -2.6 compare
Nickel (II) chloride 0.5 mM -0.4 -2.8 compare
Nickel (II) chloride 1 mM -1.2 -3.2 compare
Paraquat dichloride 0.05 mg/ml -0.4 -2.7 compare
Paraquat dichloride 0.2 mg/ml -0.4 -2.2 compare
Paraquat dichloride 0.2 mg/ml -0.4 -1.8 compare
Paraquat dichloride 0.3 mg/ml -0.9 -3.2 compare
Polymyxin B sulfate 0.00005 mg/ml -0.2 -0.6 compare
Sisomicin 0.004 mg/ml -0.5 -1.6 compare
Chloride 200 mM -0.2 -0.9 compare
Chlorite 0.1 mM -0.3 -1.5 compare
sodium fluoride 100 mM -0.2 -0.7 compare
nitrate 40 mM -0.4 -1.5 compare
nitrite 20 mM -0.1 -0.6 compare
perchlorate 10 mM -0.7 -3.3 compare
Thallium(I) acetate 0.001 mg/ml -0.5 -1.8 compare
Thallium(I) acetate 0.0025 mg/ml +0.1 +0.4 compare
temperature LB, 23C -0.2 -1.1 compare
LB, 23C -0.3 -1.5 compare
LB, 30C -0.3 -1.5 compare
LB, 30C -0.2 -1.6 compare
tsb Day1 TSB +0.2 +1.5 compare
Day2 TSB +0.1 +0.7 compare
Day3 TSB +0.2 +1.2 compare
Day4 LB -0.2 -1.3 compare
Day4 TSB +0.4 +2.6 compare
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.0 +0.2 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 -0.4 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 -0.4 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -1.1 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.1 +0.3 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -1.2 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 -0.6 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -1.3 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -1.3 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -0.9 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.4 -2.0 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI +0.0 +0.2 compare