Fitness data for SMc02570 in Sinorhizobium meliloti 1021

1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data)
Original annotation: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
SEED: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16)
KEGG: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase

All 243 fitness values, sorted by group and condition


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.8 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.5 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.4 compare
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.4 compare
Parafilmed volatile agar plate with no fungus -0.1 -0.3 compare
Parafilmed volatile agar plate with no fungus +0.3 +1.0 compare
Parafilmed volatile agar plate with no fungus -0.0 -0.1 compare
Parafilmed volatile agar plate with no fungus +0.0 +0.1 compare
Parafilmed volatile agar plate with no fungus -0.1 -0.5 compare
carbon source 5-Aminovaleric (C) -3.3 -5.9 compare
5-Aminovaleric (C) -5.5 -6.8 compare
Beta-Lactose (C) -5.0 -5.2 compare
Beta-Lactose (C) -6.9 -8.2 compare
Beta-Lactose (C) -5.1 -5.0 compare
D-Tagatose (C) -6.0 -6.6 compare
D-Arabinose (C) -5.1 -5.1 compare
D-Cellobiose (C) -5.8 -6.9 compare
D-Fructose (C) -5.9 -6.6 compare
D-Galactose (C) -5.0 -4.8 compare
D-Glucosamine Hydrochloride (C) -6.1 -6.8 compare
D-Glucose (C) -4.7 -4.7 compare
D-Glucose (C) -6.0 -8.7 compare
D-Glucose (C) -4.5 -5.1 compare
D-Glucose (C) -4.5 -5.5 compare
D-Glucose (C) -4.4 -5.4 compare
D-Glucose (C) -4.5 -5.0 compare
D-Glucose (C) -4.2 -5.0 compare
D-Leucrose (C) -6.6 -8.5 compare
D-Leucrose (C) -5.5 -6.2 compare
D-Maltose (C) -5.0 -4.8 compare
D-Mannitol (C) -4.5 -5.9 compare
D-Mannitol (C) -7.0 -4.9 compare
D-Mannose (C) -4.1 -4.3 compare
D-Mannose (C) -5.4 -6.8 compare
D-Mannose (C) -4.7 -4.8 compare
D-Raffinose (C) -6.1 -6.9 compare
D-Ribose (C) -5.8 -7.7 compare
D-Ribose (C) -4.0 -6.7 compare
D-Ribose (C) -5.3 -5.4 compare
D-Salicin (C) -5.3 -5.4 compare
D-Sorbitol (C) -5.9 -6.4 compare
D-Trehalose (C) -5.2 -5.5 compare
D-Trehalose (C) -5.2 -6.2 compare
D-Trehalose (C) -6.2 -8.3 compare
D-Xylose (C) -3.4 -4.8 compare
D-Xylose (C) -3.5 -6.4 compare
D-Xylose (C) -4.3 -4.4 compare
Glycerol (C) -4.9 -4.5 compare
L-Alanine (C) -4.1 -8.8 compare
L-Alanine (C) -3.2 -4.5 compare
L-Arabinose (C) -4.9 -6.3 compare
L-Arabinose (C) -5.0 -5.9 compare
L-Arabinose (C) -6.5 -7.9 compare
L-Fucose (C) -6.7 -9.0 compare
L-Glutamine (C) -5.9 -7.0 compare
L-Histidine (C) -0.0 -0.0 compare
L-Leucine (C) -5.4 -5.4 compare
L-Lysine (C) -4.9 -5.8 compare
L-Lysine (C) -4.5 -5.0 compare
L-Lysine (C) -5.0 -4.8 compare
L-Malic (C) -5.6 -6.5 compare
pipercolic (C) -4.9 -7.7 compare
pipercolic (C) -3.6 -4.1 compare
L-Proline (C) -5.0 -4.7 compare
L-Rhamnose (C) -4.6 -4.1 compare
Lactitol (C) -4.3 -5.6 compare
Lactitol (C) -3.7 -6.3 compare
Lactulose (C) -6.9 -8.2 compare
Lactulose (C) -5.5 -6.2 compare
m-Inositol (C) -4.2 -5.5 compare
Maltitol (C) -4.3 -4.9 compare
Maltitol (C) -5.9 -6.7 compare
Mannobiose (C) -4.6 -4.4 compare
Mannobiose (C) -4.7 -4.9 compare
methyl 3-keto-a-D-glucopyranoside (C) -6.2 -7.9 compare
methyl 3-keto-a-D-glucopyranoside (C) -4.5 -4.8 compare
Methyl beta-D-glucopyranoside (C) -6.1 -7.7 compare
Methyl beta-D-glucopyranoside (C) -5.8 -7.4 compare
methyl-beta-D-xylopyranoside (C) -5.0 -7.2 compare
methyl-beta-D-xylopyranoside (C) -5.2 -6.0 compare
Myristic (C) -4.6 -5.9 compare
Myristic (C) -3.1 -4.4 compare
NAG (C) -4.8 -4.6 compare
palatinose (C) -5.5 -5.8 compare
palatinose (C) -6.5 -8.3 compare
acetate (C) -5.7 -7.2 compare
acetate (C) -4.2 -6.4 compare
Protocatechuic Acid (C) -4.8 -6.4 compare
Protocatechuic Acid (C) -4.1 -6.6 compare
D,L-Lactate (C) -5.1 -4.9 compare
Fumarate (C) -4.6 -6.2 compare
Fumarate (C) -3.9 -6.0 compare
L-Lactate (C) -5.0 -4.8 compare
pyruvate (C) -5.3 -5.3 compare
succinate (C) -5.1 -7.1 compare
succinate (C) -4.4 -6.9 compare
succinate (C) -5.6 -5.9 compare
Sucrose (C) -5.0 -5.2 compare
Sucrose (C) -5.7 -6.4 compare
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -5.1 -5.7 compare
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) -4.2 -5.1 compare
Uridine (C) -5.0 -4.9 compare
Xylobiose (C) -4.7 -4.8 compare
Xylobiose (C) -5.1 -5.6 compare
dmso control DMSO control -0.9 -4.3 compare
DMSO control -1.2 -4.9 compare
DMSO control -0.8 -3.9 compare
DMSO control -1.0 -3.4 compare
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -4.7 -7.3 compare
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -5.0 -7.6 compare
lb LB -0.1 -0.3 compare
LB -0.1 -0.4 compare
LB -0.3 -1.5 compare
LB +0.0 +0.1 compare
LB -0.0 -0.1 compare
lb no stress control LB no stress control -1.0 -4.1 compare
LB no stress control -0.8 -4.0 compare
LB no stress control -1.0 -3.0 compare
LB no stress control -1.0 -4.4 compare
nitrogen source Cytosine (N) -2.8 -4.0 compare
D-Glucosamine Hydrochloride (N) -5.3 -9.3 compare
Gelatin (N) -2.8 -5.4 compare
Gly-DL-Asp (N) -4.4 -6.8 compare
L-Arginine (N) -4.1 -5.4 compare
L-Asparagine (N) -4.8 -6.1 compare
L-Glutamine (N) -3.7 -5.0 compare
L-Histidine (N) +0.2 +0.5 compare
L-Leucine (N) -4.0 -4.9 compare
L-Serine (N) -5.0 -7.3 compare
NAG (N) -4.2 -4.5 compare
nitrate (N) -5.9 -6.9 compare
Uridine (N) -5.9 -6.9 compare
nutrient Min media with glucose -4.7 -7.9 compare
Min media with glucose -4.0 -4.8 compare
L-Histidine -0.1 -0.4 compare
L-Histidine +0.2 +0.7 compare
L-Lysine -3.6 -4.0 compare
L-Lysine -4.7 -6.7 compare
pH LB, pH6 +0.0 +0.1 compare
LB, pH6 +0.1 +0.2 compare
LB, pH7 +0.1 +0.3 compare
LB, pH7 +0.1 +0.3 compare
LB, pH8 +0.3 +1.3 compare
LB, pH8 +0.3 +1.1 compare
r2a control R2A control -1.3 -4.1 compare
R2A control -1.5 -6.7 compare
R2A control for volatile experiments +0.4 +1.6 compare
R2A control for volatile experiments +0.0 +0.1 compare
R2A control for volatile experiments +0.4 +1.3 compare
R2A control for volatile experiments -0.1 -0.4 compare
R2A control for volatile experiments -0.1 -0.8 compare
r2a-hepes control R2A-HEPES control for volatile experiments -2.2 -7.0 compare
R2A-HEPES control for volatile experiments -1.6 -6.1 compare
R2A-HEPES control for volatile experiments -2.0 -5.8 compare
R2A-HEPES control for volatile experiments -2.6 -9.6 compare
R2A-HEPES control for volatile experiments -1.8 -6.8 compare
R2A-HEPES control for volatile experiments -2.1 -6.7 compare
R2A-HEPES control for volatile experiments -3.0 -6.0 compare
R2A-HEPES control for volatile experiments -3.4 -7.3 compare
R2A-HEPES control for volatile experiments -2.5 -4.8 compare
R2A-HEPES control for volatile experiments -3.0 -8.0 compare
R2A-HEPES control for volatile experiments -3.0 -6.7 compare
R2A-HEPES control for volatile experiments -3.3 -6.9 compare
stress 1-octen-3-ol 0.4933903333 mM -0.3 -1.6 compare
1-octen-3-ol 0.4933903333 mM -0.3 -1.6 compare
1-octen-3-ol 0.4933903333 mM -0.1 -0.6 compare
1-octen-3-ol 0.5427293333 mM -0.0 -0.0 compare
1-octen-3-ol 0.5427293333 mM -0.1 -0.4 compare
1-octen-3-ol 0.5427293333 mM -0.2 -0.7 compare
1-octen-3-ol 0.5427293333 mM -0.4 -1.6 compare
1-octen-3-ol 0.6030326667 mM -0.1 -0.5 compare
1-octen-3-ol 0.6030326667 mM -0.3 -1.3 compare
1-octen-3-ol 0.6030326667 mM -0.3 -1.3 compare
3-octanone 0.456 mM -0.4 -1.5 compare
3-octanone 0.456 mM -0.2 -1.1 compare
3-octanone 0.456 mM -0.7 -2.0 compare
3-octanone 2.655166667 mM -0.5 -2.6 compare
3-octanone 2.655166667 mM +0.0 +0.2 compare
3-octanone 2.655166667 mM -0.4 -1.6 compare
3-octanone 2.655166667 mM -0.3 -1.0 compare
3-octanone 5.310333333 mM -0.4 -1.3 compare
3-octanone 5.310333333 mM -0.5 -2.1 compare
3-octanone 5.310333333 mM +0.1 +0.3 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.4 -1.8 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.3 -1.4 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.3 -1.2 compare
6-Pentyl-2H-pyran-2-one 0.385649 mM -0.4 -1.9 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.3 -1.5 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.1 -0.4 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.4 -2.0 compare
6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.1 -0.7 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.1 -0.5 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.1 -0.4 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.4 -2.1 compare
6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.4 -1.7 compare
Aluminum chloride -0.4 -1.1 compare
Cisplatin 0.0005 mg/ml +0.1 +0.4 compare
Cisplatin 0.001 mg/ml -0.2 -0.7 compare
Cobalt chloride 0.16 mM +0.3 +1.7 compare
copper (II) chloride 1 mM -4.2 -10.6 compare
copper (II) chloride 1 mM -2.2 -4.7 compare
D-Cycloserine 0.05 mg/ml -0.5 -1.9 compare
Fusidic 0.0001 mg/ml -0.1 -0.3 compare
A22 0.02 mg/ml -0.2 -1.0 compare
Nickel (II) chloride 0.5 mM +0.1 +0.6 compare
Nickel (II) chloride 1 mM -2.8 -5.0 compare
Paraquat dichloride 0.05 mg/ml -0.4 -1.9 compare
Paraquat dichloride 0.2 mg/ml -0.0 -0.1 compare
Paraquat dichloride 0.2 mg/ml +0.1 +0.4 compare
Paraquat dichloride 0.3 mg/ml -0.2 -1.0 compare
Polymyxin B sulfate 0.00005 mg/ml -0.2 -0.5 compare
Sisomicin 0.004 mg/ml -0.9 -1.9 compare
Chloride 200 mM -0.3 -1.2 compare
Chlorite 0.1 mM -0.4 -1.0 compare
sodium fluoride 100 mM -0.1 -0.6 compare
nitrate 40 mM -0.4 -1.3 compare
nitrite 20 mM +0.2 +0.8 compare
perchlorate 10 mM +0.0 +0.0 compare
Thallium(I) acetate 0.001 mg/ml -0.1 -0.4 compare
Thallium(I) acetate 0.0025 mg/ml +0.0 +0.1 compare
temperature LB, 23C +0.1 +0.6 compare
LB, 23C -0.1 -0.5 compare
LB, 30C -0.1 -0.4 compare
LB, 30C -0.1 -0.5 compare
tsb Day1 TSB -0.3 -1.3 compare
Day2 TSB -0.1 -1.0 compare
Day3 TSB -0.3 -1.5 compare
Day4 LB -0.4 -1.9 compare
Day4 TSB -0.1 -0.6 compare
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.3 -9.6 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.4 -6.3 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.5 -6.9 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -1.8 -5.9 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.8 -7.4 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.7 -8.0 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -4.6 -9.2 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -2.9 -7.0 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -3.0 -5.4 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -3.9 -9.1 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -3.0 -9.0 compare
R2A-HEPES with volatiles from Trichoderma atroviridae IMI -3.3 -4.8 compare