Fitness data for RR42_RS02085 in Cupriavidus basilensis FW507-4G11

RNA polymerase subunit sigma-54
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-54 factor

All 143 fitness values, sorted by group and condition


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group condition fitness t score  
carbon source Carbon source 2-Deoxy-D-Ribose 20 mM +1.7 +7.0 compare
Carbon source 2-Deoxy-D-Ribose 20 mM +1.9 +9.2 compare
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +1.5 +8.1 compare
Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.7 +3.8 compare
4-Hydroxybenzoic Acid (C) +0.7 +3.1 compare
4-Hydroxybenzoic Acid (C) +0.7 +3.1 compare
a-Ketoglutaric (C) -1.7 -5.5 compare
a-Ketoglutaric (C) -1.4 -5.0 compare
Azelaic (C) +0.3 +1.2 compare
Azelaic (C) +0.7 +2.9 compare
D-Fructose (C) -0.1 -0.4 compare
D-Gluconic Acid (C) -0.8 -2.6 compare
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.7 +2.9 compare
Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.4 +1.3 compare
Carbon source Deoxyribonucleic from herring sperm 10 mg/mL +1.5 +7.1 compare
Disodium Glutarate (C) -0.6 -2.7 compare
Disodium Glutarate (C) -0.2 -0.6 compare
Dodecandioic (C) +0.6 +2.5 compare
Dodecandioic (C) +0.3 +1.1 compare
Ethanol (C) -3.8 -6.9 compare
Ethanol (C) -3.6 -8.6 compare
Heptanoic (C) -3.1 -7.7 compare
Heptanoic (C) -3.8 -7.3 compare
Hexanoic (C) +0.1 +0.6 compare
Hexanoic (C) +0.2 +0.8 compare
L-Alanine (C) -0.7 -2.0 compare
L-Alanine (C) -1.1 -3.5 compare
L-Asparagine (C) -1.1 -4.7 compare
L-Asparagine (C) -0.8 -2.5 compare
L-Glutamine (C) -0.4 -1.8 compare
L-Glutamine (C) -0.5 -2.2 compare
L-Histidine (C) -1.7 -6.6 compare
L-Histidine (C) -2.4 -6.6 compare
L-Leucine (C) -0.6 -2.3 compare
L-Leucine (C) -1.0 -5.0 compare
L-Malic (C) -2.7 -6.9 compare
L-Malic (C) -3.5 -8.7 compare
L-Phenylalanine (C) -0.3 -1.5 compare
L-Proline (C) -0.8 -3.4 compare
L-Threonine (C) +0.4 +2.2 compare
L-Tryptophan (C) -1.3 -4.6 compare
L-Tryptophan (C) -1.0 -4.3 compare
Octanoic (C) +1.2 +8.0 compare
Octanoic (C) +1.4 +6.0 compare
Carbon source Phenylacetic 2.5 mM +0.1 +0.4 compare
Carbon source Phenylacetic 2.5 mM +0.1 +0.3 compare
Pimelic (C) +0.4 +1.8 compare
Pimelic (C) +0.3 +1.1 compare
Protocatechuic Acid (C) -0.2 -0.8 compare
Protocatechuic Acid (C) -0.1 -0.5 compare
adipate (C) +0.2 +0.6 compare
adipate (C) +1.0 +3.6 compare
butyrate (C) -0.1 -0.6 compare
D,L-Lactate (C) +0.1 +0.6 compare
Carbon source D,L-Lactate 10 mM -0.3 -1.0 compare
D,L-Lactate (C) +0.1 +0.4 compare
D,L-Lactate (C) +0.5 +2.4 compare
D-Lactate (C) +0.7 +3.5 compare
D-Lactate (C) +0.5 +2.8 compare
L-Lactate (C) -0.1 -0.3 compare
L-Lactate (C) -0.1 -0.5 compare
propionate (C) -3.5 -7.8 compare
propionate (C) -3.0 -6.1 compare
propionate (C) -3.1 -6.5 compare
pyruvate (C) +0.1 +0.7 compare
pyruvate (C) +0.3 +1.1 compare
succinate (C) -1.7 -5.7 compare
succinate (C) -2.6 -7.8 compare
succinate (C) -1.9 -7.3 compare
succinate (C) -2.2 -6.4 compare
Suberic (C) +0.3 +1.4 compare
Suberic (C) +0.2 +0.7 compare
Trisodium citrate (C) -0.2 -1.0 compare
Valeric (C) -2.9 -7.5 compare
Valeric (C) -2.6 -5.8 compare
lb LB -1.2 -3.0 compare
nitrogen source casaminos (N) -0.5 -1.8 compare
D-Alanine (N) -3.4 -8.6 compare
D-Alanine (N) -3.4 -8.2 compare
Glucuronamide (N) -2.2 -7.3 compare
Glycine (N) -1.5 -5.2 compare
L-Asparagine (N) -0.5 -1.9 compare
L-Citrulline (N) -3.6 -7.9 compare
L-Glutamine (N) -0.2 -0.7 compare
L-Isoleucine (N) -3.0 -7.4 compare
L-Isoleucine (N) -2.7 -7.3 compare
L-Leucine (N) -1.6 -5.0 compare
L-Leucine (N) -2.2 -5.5 compare
L-Lysine (N) -3.8 -7.9 compare
L-Phenylalanine (N) -0.5 -1.8 compare
L-Serine (N) -3.0 -7.6 compare
L-Serine (N) -3.1 -7.7 compare
L-Threonine (N) -0.8 -3.0 compare
L-Tryptophan (N) -2.3 -7.0 compare
L-Tryptophan (N) -2.3 -7.7 compare
L-Valine (N) -2.9 -7.7 compare
L-Valine (N) -3.3 -7.2 compare
nitrate (N) -3.7 -7.6 compare
nitrite (N) -3.3 -7.1 compare
oxygen_nitrate exometabolites; 5% oxygen; 5 mM nitrate +0.1 +0.5 compare
exometabolites; 10% oxygen; 5 mM nitrate -0.1 -0.6 compare
exometabolites; 10% oxygen; 5 mM nitrate -0.1 -0.5 compare
exometabolites; 10% oxygen; 5 mM nitrate -0.1 -0.4 compare
r2a R2A -0.1 -0.7 compare
R2A +0.1 +0.3 compare
R2A -0.2 -0.8 compare
stress R2A with Bacitracin 0.5 mg/ml -0.6 -3.1 compare
R2A with Cephalothin 0.25 mg/ml -0.4 -1.8 compare
R2A with Cisplatin 0.001 mg/ml +0.3 +0.9 compare
R2A with Cisplatin 0.001 mg/ml -0.8 -3.3 compare
R2A with Cobalt chloride 0.3 mM +0.3 +1.4 compare
R2A with Cobalt chloride 0.5 mM -0.8 -2.9 compare
R2A with copper (II) chloride 0.25 mM +0.7 +3.7 compare
R2A with D-Cycloserine 0.01 mg/ml +0.2 +1.1 compare
R2A with D-Cycloserine 0.5 mg/ml -0.3 -1.4 compare
R2A with Dimethyl Sulfoxide 5 vol% -0.1 -0.6 compare
R2A with Doxycycline hyclate 0.0001 mg/ml +0.0 +0.1 compare
R2A with Lomefloxacin 0.00075 mM +0.1 +0.6 compare
R2A with Lomefloxacin 0.001 mM -0.3 -1.0 compare
R2A with A22 0.01 mg/ml +0.9 +5.0 compare
R2A with Nickel (II) chloride 0.25 mM +0.3 +1.3 compare
R2A with Nickel (II) chloride 0.25 mM +0.2 +0.6 compare
R2A with Nickel (II) chloride 0.35 mM +1.4 +6.7 compare
R2A with Nickel (II) chloride 0.35 mM +0.6 +2.7 compare
R2A with Nickel (II) chloride 0.5 mM +2.6 +11.8 compare
R2A with Paraquat dichloride 0.064 mg/ml +0.3 +1.3 compare
R2A with Polymyxin B sulfate 0.005 mg/ml +1.5 +7.7 compare
R2A with Sisomicin 0.035 mg/ml +0.5 +2.2 compare
R2A with Chloride 300 mM +0.1 +0.5 compare
R2A with Chloride 300 mM +0.1 +0.4 compare
R2A with Chlorite 4 mM +0.2 +1.1 compare
R2A with Chlorite 4 mM -0.0 -0.1 compare
R2A with sodium fluoride 100 mM -0.4 -1.9 compare
R2A with nitrate 150 mM +0.3 +1.0 compare
R2A with nitrate 200 mM +0.3 +1.3 compare
R2A with nitrate 200 mM +0.5 +2.6 compare
R2A with Thallium(I) acetate 0.001 mg/ml +1.1 +5.6 compare
R2A with Vancomycin 0.5 mg/ml -0.7 -3.2 compare
R2A with Vancomycin 0.5 mg/ml -0.4 -1.4 compare
R2A with Zinc 0.1 mM -0.7 -2.7 compare
temperature R2A 23C -0.1 -0.5 compare
R2A 23C -0.2 -0.8 compare
R2A 37C -0.1 -0.2 compare