Fitness data for PFLU_RS15130 in Pseudomonas fluorescens SBW25-INTG

cupin
SEED: Gentisate 1,2-dioxygenase (EC 1.13.11.4)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.0 -3.7 compare
nitrogen source NAG (N); with MOPS -0.9 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.9 -3.4 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.9 -2.4 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.9 -2.7 compare
carbon source D-Glucose (C); with MOPS -0.7 -3.3 compare
stress Betaine (C)(N); with MOPS; with chloride -0.7 -2.6 compare
carbon source D-Galactose (C) -0.7 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -3.8 compare
stress Glucose (C) and L-Glutamine (N); with TAPS; with chloride -0.7 -3.2 compare
nitrogen source nitrate (N); with MOPS -0.7 -2.0 compare
temperature Growth at 25C; with MOPS -0.6 -1.9 compare
stress Betaine (C)(N); with TAPS; with chloride -0.6 -2.1 compare
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS +0.6 +2.7 compare
carbon source acetate (C) +0.6 +2.6 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 +2.5 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.8 +2.7 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +1.0 +4.5 compare