Fitness data for PFLU_RS09975 in Pseudomonas fluorescens SBW25-INTG

EAL and GGDEF domain-containing protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.4 compare
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.5 -2.1 compare
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.5 -2.4 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -2.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -2.2 compare
stress Betaine (C)(N); with MOPS; with chloride -0.4 -1.9 compare
carbon source Xanthosine (C) -0.4 -1.7 compare
pH Growth at pH9 and (C) D-Glucose -0.4 -2.1 compare
carbon source Shikimic Acid (C) -0.4 -1.8 compare
stress Betaine (C)(N); with MOPS; with chloride -0.4 -1.9 compare
carbon source 4-Guanidinobutyric (C) -0.4 -2.6 compare
carbon source 4-Hydroxybenzoic Acid 2 mM (C) -0.4 -1.9 compare
carbon source L-Lysine (C) -0.4 -1.9 compare
carbon source acetate (C) -0.4 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.3 -2.5 compare
carbon source D-Glucose (C); with MOPS +0.3 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.8 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 +2.0 compare
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 +2.9 compare
nitrogen source nitrate (N); with MOPS +0.5 +2.8 compare