Ribose import permease protein RbsC
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)
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| group | condition | fitness | t score | |
|---|
| carbon source | D-Ribose (C) | -2.0 | -9.0 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -1.1 | -3.8 | compare |
| mixed community | M9 plate, 1:1 coculture with Rhodococcus aetherivorans MH2 | -0.9 | -3.3 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 | -0.9 | -3.4 | compare |
| mixed community | TSB plate, 1:1 coculture with Brevibacillus agri TBS_043 | -0.9 | -3.2 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.9 | -3.0 | compare |
| mixed community | AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 | -0.8 | -2.3 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.8 | -3.9 | compare |
| mixed community | TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 | -0.7 | -2.9 | compare |
| mixed community | M9 plate, 1:1 coculture with Brevibacillus agri TBS_043 | -0.7 | -2.8 | compare |
| nitrogen source | L-Tryptophan (N) | -0.7 | -2.5 | compare |
| carbon source | Xylitol (C) | -0.7 | -2.2 | compare |
| nitrogen source | D-Salicin (N) | -0.7 | -1.7 | compare |
| mixed community | 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.7 | -2.2 | compare |
| carbon source | propionate (C) | +0.6 | +2.4 | compare |
| nitrogen source | D-Alanine (N) | +0.7 | +2.7 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.8 | +2.9 | compare |
| mixed community | TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b | +0.8 | +1.7 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.9 | +2.3 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.0 | +1.9 | compare |