Ribose import binding protein RbsB
SEED: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
KEGG: ribose transport system substrate-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)
Or see all 355 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| carbon source | D-Ribose (C) | -3.0 | -5.5 | compare |
| mixed community | AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 | -1.4 | -1.3 | compare |
| mixed community | TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 | -1.3 | -2.0 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 | -1.2 | -3.6 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -1.2 | -2.2 | compare |
| carbon source | Ethanol (C) | -1.0 | -1.3 | compare |
| nitrogen source | butyrate (N) | -1.0 | -1.4 | compare |
| carbon source | Fumarate (C) | +0.9 | +1.4 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021 | +1.0 | +2.5 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030 | +1.0 | +2.9 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | +1.0 | +1.4 | compare |
| mixed community | TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 | +1.1 | +2.8 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.1 | +2.9 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | +1.1 | +2.6 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.2 | +3.4 | compare |
| mixed community | TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 | +1.3 | +2.9 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.4 | +4.1 | compare |
| mixed community | TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b | +1.6 | +3.2 | compare |
| mixed community | M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b | +1.8 | +1.8 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Paenibacillus lautus 004-C1 | +1.8 | +2.0 | compare |