tRNA pseudouridine synthase B
SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
KEGG: tRNA pseudouridine synthase B
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)
Or see all 355 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.9 | -3.9 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -0.9 | -2.4 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 | -0.8 | -2.3 | compare |
| mixed community | AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.01 | -0.8 | -3.1 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.8 | -1.9 | compare |
| mixed community | LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049 | -0.8 | -2.4 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 | -0.7 | -2.2 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.7 | -2.0 | compare |
| mixed community | TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.7 | -2.0 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.7 | -1.7 | compare |
| mixed community | TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 | -0.7 | -2.2 | compare |
| nitrogen source | D-Salicin (N) | -0.7 | -2.1 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041 | +0.7 | +0.9 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2 | +0.7 | +1.5 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.7 | +2.2 | compare |
| carbon source | L-Proline (C) | +0.9 | +4.9 | compare |
| mixed community | LB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027 | +1.0 | +1.6 | compare |
| mixed community | LB plate, 1:1 coculture with Enterobacter_ludwigii_PH2 | +1.0 | +2.6 | compare |
| mixed community | TSB plate, 1:1 coculture with AMD2732 | +1.7 | +1.6 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.9 | +3.5 | compare |