putative HTH-type transcriptional regulator YahB
SEED: Putative HTH-type transcriptional regulator yahB
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)
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| group | condition | fitness | t score | |
|---|
| nitrogen source | Parabanic Acid (N) | -0.8 | -5.2 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -0.8 | -3.8 | compare |
| carbon source | Carnitine Hydrochloride (C) | -0.5 | -2.7 | compare |
| nitrogen source | butyrate (N) | -0.4 | -2.1 | compare |
| carbon source | 4-Hydroxybenzoic Acid (C) | -0.4 | -1.9 | compare |
| mixed community | M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b | +0.4 | +1.7 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030 | +0.4 | +2.2 | compare |
| mixed community | M9 plate, 1:1 coculture with Brevibacillus agri TBS_043 | +0.4 | +2.2 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus haynesii TBS_113 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.4 | +2.0 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090 | +0.4 | +2.0 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2 | +0.4 | +2.2 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 | +0.5 | +1.6 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 | +0.5 | +2.8 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.5 | +2.2 | compare |
| mixed community | TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 | +0.5 | +3.0 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031 | +0.6 | +2.5 | compare |
| mixed community | TSB plate, 1:1 coculture with Paenibacillus lautus TBS_090 | +0.6 | +2.9 | compare |
| mixed community | TSB plate, 1:1 coculture with AMD2732 | +0.6 | +2.4 | compare |
| mixed community | M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 | +0.7 | +3.3 | compare |
| mixed community | M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 | +0.8 | +3.4 | compare |