Fitness data for MPMX20_03463 in Enterobacter sp. TBS_079

Ribosomal large subunit pseudouridine synthase D
SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 -3.8 -7.3 compare
mixed community AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 -2.9 -6.4 compare
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -2.7 -6.5 compare
mixed community LB plate, 1:1 coculture with Chryseobacterium_gleum_TBS_030 -2.7 -4.8 compare
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 -2.6 -1.8 compare
mixed community AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 -2.5 -5.7 compare
nitrogen source D-Serine (N) -2.4 -6.7 compare
mixed community AMD2036 coinoculated with AMD2590 on TSA to a starting OD of 0.01 -2.3 -8.8 compare
carbon source D-Xylose (C) -2.3 -7.8 compare
nitrogen source Putrescine (N) -2.2 -7.1 compare
motility; outer cut Motility test in 1X LB; 1 day; outer cut; 0.3% agar -2.2 -4.8 compare
mixed community TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2 -2.2 -3.9 compare
mixed community AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 -2.2 -5.6 compare
mixed community AMD2036 coinoculated with AMD2587 on RCH2 to a starting OD of 0.0001 -2.1 -6.1 compare
mixed community AMD2036 coinoculated with AMD2910 on RCH2 to a starting OD of 0.001 -2.0 -4.5 compare
mixed community AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.01 -1.9 -5.4 compare
mixed community TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 -1.9 -4.2 compare
carbon source L-Valine (C) -1.9 -4.3 compare
in planta Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 -1.8 -5.8 compare
mixed community LB plate, 1:1 coculture with Enterobacter_ludwigii_PH2 -1.7 -4.6 compare