2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
SEED: HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217)
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)
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| group | condition | fitness | t score | |
|---|
| mixed community | M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 | -0.9 | -2.1 | compare |
| carbon source | Formate (C) | -0.9 | -2.2 | compare |
| carbon source | butyrate (C) | -0.9 | -1.7 | compare |
| carbon source | L-Valine (C) | -0.7 | -1.4 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031 | -0.7 | -2.4 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.7 | +1.8 | compare |
| mixed community | M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.7 | +1.3 | compare |
| mixed community | LB plate, 1:1 coculture with Enterobacter_ludwigii_PH2 | +0.7 | +2.1 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055 | +0.7 | +1.3 | compare |
| carbon source | D-Cellobiose (C) | +0.8 | +2.0 | compare |
| mixed community | M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b | +0.8 | +2.1 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Flavobacterium anhuiense SO6b | +0.9 | +2.0 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.9 | +2.1 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 | +1.0 | +2.3 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.1 | +1.3 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.1 | +1.5 | compare |
| mixed community | TSB plate, 1:1 coculture with Rhizobium pusense TBS_045 | +1.2 | +1.5 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 | +1.3 | +2.2 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.3 | +1.7 | compare |
| mixed community | TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 | +1.3 | +2.0 | compare |