Alanine racemase, catabolic
SEED: Alanine racemase, catabolic (EC 5.1.1.1)
KEGG: alanine racemase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)
Or see all 355 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| carbon source | L-Alanine (C) | -4.8 | -8.0 | compare |
| nitrogen source | L-Alanine (N) | -4.5 | -6.8 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -1.6 | -3.9 | compare |
| nitrogen source | L-Lysine (N) | -1.5 | -5.0 | compare |
| mixed community | TSB plate, 1:1 coculture with Paraburkholderia pittii CO4 | -1.3 | -3.2 | compare |
| nitrogen source | L-Citrulline (N) | -1.1 | -4.3 | compare |
| mixed community | TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031 | -1.0 | -4.1 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Paraburkholderia pittii CO4 | -1.0 | -3.3 | compare |
| mixed community | AMD2036 coinoculated with AMD2587 on LB to a starting OD of 0.001 | -0.9 | -2.1 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 | -0.9 | -2.3 | compare |
| mixed community | LB plate, 1:1 coculture with Enterobacter_ludwigii_PH2 | -0.9 | -2.9 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.9 | -2.9 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.9 | -4.7 | compare |
| mixed community | LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049 | -0.8 | -1.7 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_030 | -0.8 | -3.5 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.8 | -2.8 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.9 | +3.0 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.1 | +3.5 | compare |
| mixed community | TSB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | +1.1 | +2.5 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Microbacterium atlanticum SAI_030 | +2.2 | +2.3 | compare |