HTH-type transcriptional regulator LrpC
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
KEGG: Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)
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| group | condition | fitness | t score | |
|---|
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -1.4 | -3.9 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Burkholderia territorio SO8-2 | -1.2 | -3.8 | compare |
| motility; outer cut | Motility test in 1X LB; 1 day; outer cut; 0.3% agar | -1.0 | -4.7 | compare |
| motility; outer cut | Motility test in 1X LB; 1 day; outer cut; 0.3% agar | -0.9 | -3.3 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 | -0.8 | -3.4 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 | -0.8 | -3.1 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.8 | -2.3 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.7 | -3.4 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.7 | -3.2 | compare |
| mixed community | 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 | -0.7 | -2.9 | compare |
| mixed community | M9 plate, 1:1 coculture with Flavobacterium anhuiense SO6b | -0.7 | -3.0 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.6 | -2.2 | compare |
| mixed community | M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 | -0.6 | -2.6 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_055 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.6 | -2.5 | compare |
| mixed community | M9 plate, 1:1 coculture with Brevibacillus agri TBS_043 | -0.6 | -2.2 | compare |
| mixed community | M9 plate, 1:1 coculture with Microbacterium atlanticum SAI_030 | -0.6 | -3.0 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_TBS_079 | +0.6 | +1.6 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 | +0.7 | +2.3 | compare |
| mixed community | TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 | +0.9 | +3.0 | compare |
| mixed community | TSB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027 | +1.1 | +2.1 | compare |