Constitutive lysine decarboxylase
SEED: Lysine decarboxylase 2, constitutive (EC 4.1.1.18)
KEGG: lysine decarboxylase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)
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| group | condition | fitness | t score | |
|---|
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.9 | -3.4 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -0.9 | -3.2 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055 | -0.6 | -2.9 | compare |
| mixed community | TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.3 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.7 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_TBS_079 | -0.5 | -1.9 | compare |
| mixed community | M9 plate, Mixed culture; Micromonospora sp. SAI_152 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.5 | compare |
| carbon source | butyrate (C) | -0.4 | -1.9 | compare |
| mixed community | AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001 | +0.4 | +2.1 | compare |
| mixed community | TSB plate, 1:1 coculture with Enterobacter_ludwigii_PH2 | +0.5 | +1.7 | compare |
| mixed community | M9 plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.5 | +1.2 | compare |
| mixed community | 1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.5 | +2.0 | compare |
| carbon source | L-Lactate (C) | +0.5 | +2.6 | compare |
| mixed community | M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 | +0.5 | +2.3 | compare |
| mixed community | M9 plate, 1:1 coculture with Bacillus megaterium TBS_037 | +0.5 | +2.1 | compare |
| nitrogen source | D-Tagatose (N) | +0.5 | +2.3 | compare |
| mixed community | TSB plate, 1:1 coculture with Bacillus_pumilus_TBS_103 | +0.5 | +2.2 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031 | +0.5 | +1.4 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.6 | +2.0 | compare |
| mixed community | M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.7 | +1.9 | compare |