Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase
SEED: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
KEGG: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)
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| group | condition | fitness | t score | |
|---|
| carbon source | L-tyrosine (C) | -0.8 | -3.9 | compare |
| mixed community | 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.7 | -3.4 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.6 | -2.6 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -3.1 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.9 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.8 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -0.5 | -2.1 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.9 | compare |
| mixed community | M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027 | -0.5 | -3.2 | compare |
| mixed community | 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.6 | compare |
| mixed community | 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.5 | -2.2 | compare |
| mixed community | M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046 | -0.5 | -2.8 | compare |
| mixed community | LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049 | -0.5 | -1.8 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.4 | -2.7 | compare |
| carbon source | Carnitine Hydrochloride (C) | -0.4 | -2.1 | compare |
| mixed community | 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.4 | -2.2 | compare |
| mixed community | TSB plate, Mixed culture; Streptomyces sp. SAI_133 1:1 starding OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.5 | +1.9 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.5 | +1.7 | compare |
| carbon source | L-Arabinose (C) | +0.5 | +2.8 | compare |
| mixed community | TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 | +0.6 | +2.6 | compare |