2-dehydro-3-deoxy-phosphogluconate aldolase
SEED: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) in D-glucosaminate utilization operon
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)
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| group | condition | fitness | t score | |
|---|
| mixed community | AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001 | -1.2 | -2.7 | compare |
| nitrogen source | Gly-Glu (N) | -0.8 | -3.6 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040 | -0.7 | -2.2 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.7 | -1.9 | compare |
| mixed community | AMD2036 coinoculated with AMD2590 on LB to a starting OD of 0.01 | -0.6 | -1.6 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075 | -0.6 | -1.9 | compare |
| mixed community | M9 plate, 1:1 coculture with Paenibacillus favisporus 004-C2 | -0.6 | -2.0 | compare |
| mixed community | LB agar plate coculture with Mixed culture; Pseudomonas plecoglossicida TBS_049 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection=direct | -0.6 | -2.4 | compare |
| mixed community | M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | -0.6 | -1.9 | compare |
| nitrogen source | L-Citrulline (N) | -0.6 | -2.4 | compare |
| mixed community | 1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 | -0.6 | -2.5 | compare |
| carbon source | L-Lactate (C) | -0.6 | -2.2 | compare |
| nitrogen source | D-Tagatose (N) | +0.6 | +2.3 | compare |
| mixed community | TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.6 | +1.5 | compare |
| carbon source | propionate (C) | +0.6 | +1.7 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | +0.6 | +1.7 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2 | +0.7 | +2.5 | compare |
| carbon source | Itaconic Acid (C) | +0.7 | +2.6 | compare |
| mixed community | 1X LB plate, Mixed culture; Bacillus subtilis TBS_111 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.9 | +1.5 | compare |
| mixed community | TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 | +1.4 | +1.8 | compare |