Xylose isomerase
SEED: Xylose isomerase (EC 5.3.1.5)
KEGG: xylose isomerase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)
Or see all 355 experiments or choose conditions
| group | condition | fitness | t score | |
|---|
| carbon source | D-Xyl (C) | -6.6 | -20.3 | compare |
| carbon source | D-Xyl (C) | -5.9 | -32.4 | compare |
| carbon source | D-Xyl (C) | -5.8 | -33.8 | compare |
| carbon source | D-Xylose (C) | -4.5 | -33.2 | compare |
| carbon source | L-Fucose (C) | -0.4 | -3.3 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.4 | -3.1 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4 | -0.3 | -2.6 | compare |
| motility; outer cut | Motility test in 1X LB; 1 day; outer cut; 0.3% agar | -0.2 | -1.9 | compare |
| in planta | Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5 | -0.2 | -1.5 | compare |
| carbon source | Gelatin (C) | -0.2 | -1.5 | compare |
| mixed community | 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_051 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.2 | +1.3 | compare |
| mixed community | 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.2 | +1.2 | compare |
| mixed community | M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 | +0.2 | +1.3 | compare |
| mixed community | 1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.2 | +1.4 | compare |
| mixed community | TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 | +0.2 | +1.5 | compare |
| mixed community | M9 plate, 1:1 coculture with Microbacterium trichothecenolyticum CFG_272 | +0.2 | +1.6 | compare |
| mixed community | M9 plate, Mixed culture; Bacillus zanthoxyli TBS_056 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct | +0.2 | +1.7 | compare |
| mixed community | LB plate, 1:1 coculture with Chryseobacterium_proteolyticum_TBS_027 | +0.2 | +1.7 | compare |
| mixed community | LB plate, 1:1 coculture with Chryseobacterium_gleum_TBS_030 | +0.2 | +1.8 | compare |
| mixed community | RCH2_defined_glucose plate, 1:1 coculture with Bacillus_zanthoxyli_TBS_055 | +0.3 | +2.3 | compare |