diaminopimelate decarboxylase
SEED: Diaminopimelate decarboxylase (EC 4.1.1.20)
KEGG: diaminopimelate decarboxylase
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)
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| group | condition | fitness | t score | |
|---|
| stress | McCas_formate_complete hypophosphite 62.5 mM | -3.5 | -1.1 | compare |
| nutrient t2 | Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE | -3.3 | -1.7 | compare |
| stress | McCas_formate_complete sodium nitrite 0.416666666666667 mM | -3.1 | -0.9 | compare |
| nutrient t2 | Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE | -3.0 | -3.0 | compare |
| stress | McCas_formate_complete phosphite 25 mM | -3.0 | -1.2 | compare |
| stress | McCas_formate_complete sulfate 125 mM | -2.9 | -0.9 | compare |
| planktonic | H2 pooled triplicate planktonic cells | -2.9 | -1.4 | compare |
| stress | McCas_formate_complete selenate 31.25 mM | -2.8 | -1.5 | compare |
| nutrient t2 | Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE | -2.8 | -1.8 | compare |
| nutrient t2 | H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE | -2.7 | -1.5 | compare |
| nutrient t2 | Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE | -2.7 | -2.6 | compare |
| nitrogen source | H2 N-free with 2mM Adenosine | -2.6 | -0.8 | compare |
| no stress control | McCas_formate_complete no stress control | -2.6 | -1.7 | compare |
| rich t2 | H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 | -2.4 | -2.2 | compare |
| nutrient t2 | Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE | -2.3 | -1.8 | compare |
| stress | McCas_formate_complete Nitrofurantoin 0.025 mM | -2.3 | -1.0 | compare |
| rich t2 | H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE | -2.1 | -2.4 | compare |
| nutrient t2 | H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE | -2.1 | -1.8 | compare |
| attachment assay; attached sample | McCas-formate glass attached | -2.0 | -1.7 | compare |
| stress | McCas_formate_complete phosphite 25 mM | -2.0 | -1.3 | compare |