Fitness data for MMJJ_RS01600 in Methanococcus maripaludis JJ

radical SAM protein
SEED: Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB
KEGG: nitrogen fixation protein NifB

All 217 fitness values, sorted by group and condition


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group condition fitness t score  
attachment assay; attached sample McCas-formate glass attached -4.0 -1.4 compare
McCas-formate glass attached -3.9 -1.7 compare
McCas-formate glass attached -1.3 -0.9 compare
McCas-formate glass attached -2.0 -1.6 compare
McCas-formate low carbon steel attached -0.8 -0.8 compare
McCas-formate low carbon steel attached -1.1 -1.3 compare
McCas-formate low carbon steel attached -1.1 -1.3 compare
McCas-formate low carbon steel attached -0.4 -0.6 compare
attachment assay; planktonic sample McCas glass planktonic +0.3 +0.8 compare
McCas low carbon steel planktonic +0.8 +2.1 compare
McCas-formate glass planktonic -1.2 -2.4 compare
McCas-formate glass planktonic -0.2 -0.4 compare
McCas-formate glass planktonic -0.8 -1.5 compare
McCas-formate glass planktonic -0.4 -0.7 compare
McCas-formate low carbon steel planktonic +0.0 +0.1 compare
McCas-formate low carbon steel planktonic -1.5 -2.5 compare
McCas-formate low carbon steel planktonic -0.5 -1.0 compare
McCas-formate low carbon steel planktonic +0.1 +0.3 compare
biofilm Formate pooled triplicate biofilm cells -2.6 -3.5 compare
H2 pooled triplicate biofilm cells -2.0 -2.3 compare
formate no stress control Formate no stress control -2.6 -3.9 compare
Formate no stress control -3.6 -4.5 compare
Formate no stress control -2.7 -2.6 compare
freezer Collected from freezer stock +0.6 +1.3 compare
Collected from freezer stock +0.6 +1.5 compare
Collected from freezer stock +0.5 +1.6 compare
Collected from freezer stock +0.3 +1.1 compare
hydrogen no stress control H2 no stress control -4.1 -4.7 compare
H2 no stress control -3.6 -5.4 compare
iron Iron limitation (0.2x), H2 media -2.3 -3.0 compare
Iron limitation (0.2x), H2 media -2.5 -3.7 compare
Iron limitation (0.2x), H2 media -3.6 -4.6 compare
Iron limitation (0.2x), formate media -2.2 -3.9 compare
Iron limitation (0.2x), formate media -4.9 -3.3 compare
Iron limitation (0.2x), formate media -2.7 -3.7 compare
control, 1x iron with casaminos and vitamins, H2 media -3.4 -3.6 compare
control, 1x iron with casaminos and vitamins, H2 media -4.6 -2.8 compare
control, 1x iron with casaminos and vitamins, H2 media -4.6 -3.2 compare
control, 1x iron with casaminos and vitamins, formate media -3.1 -3.9 compare
control, 1x iron with casaminos and vitamins, formate media -2.8 -3.7 compare
control, 1x iron with casaminos and vitamins, formate media -3.4 -4.5 compare
Iron excess (2.5x) , H2 media -4.6 -2.8 compare
Iron excess (2.5x) , H2 media -4.6 -2.2 compare
Iron excess (2.5x) , H2 media -4.6 -2.8 compare
Iron excess (2.5x) , formate media -2.7 -4.4 compare
Iron excess (2.5x) , formate media -3.3 -4.4 compare
Iron excess (2.5x) , formate media -2.2 -3.3 compare
nitrogen source N2 fixation, H2 media -1.2 -0.9 compare
H2 N-free with 2mM Adenosine -2.1 -1.6 compare
H2 N-free with 2mM Adenosine -1.0 -0.7 compare
H2 N-free with 2mM Adenosine -1.5 -0.9 compare
Formate N-free with 2mM Adenosine -3.3 -1.5 compare
Formate N-free with 2mM Adenosine -3.0 -1.3 compare
Formate N-free with 2mM Adenosine -3.5 -1.8 compare
H2 N-free with 10mM Ammonium chloride -3.4 -3.4 compare
H2 N-free with 10mM Ammonium chloride -4.7 -3.0 compare
H2 N-free with 10mM Ammonium chloride -3.3 -3.3 compare
formate N-free with 10mM Ammonium chloride -1.5 -2.8 compare
formate N-free with 10mM Ammonium chloride -2.9 -4.7 compare
formate N-free with 10mM Ammonium chloride -3.4 -4.5 compare
H2 N-free with 2g/L casaminos -4.7 -3.2 compare
H2 N-free with 2g/L casaminos -3.1 -3.3 compare
H2 N-free with 2g/L casaminos -3.2 -4.0 compare
H2 N-free with 2g/L casaminos 10mM Ammonium chloride -3.3 -3.9 compare
H2 N-free with 2g/L casaminos 10mM Ammonium chloride -4.6 -3.0 compare
H2 N-free with 2g/L casaminos 10mM Ammonium chloride -4.7 -3.3 compare
H2 N-free with 10mM D-glucosamine -4.0 -2.4 compare
H2 N-free with 10mM D-glucosamine -3.7 -2.5 compare
H2 N-free with 10mM D-glucosamine -3.2 -2.6 compare
no stress control McCas_formate_complete no stress control -2.3 -1.1 compare
McCas_formate_complete no stress control -0.7 -0.5 compare
McCas_formate_complete no stress control -2.0 -0.8 compare
McCas_formate_complete no stress control -2.2 -1.0 compare
McCas_formate_complete no stress control -1.7 -0.9 compare
McCas_formate_complete no stress control -0.6 -0.6 compare
McCas_formate_complete no stress control -1.3 -0.5 compare
McCas_formate_complete no stress control -1.7 -0.9 compare
nutrient t1 formate McAA B12 dropout -3.5 -4.5 compare
formate McAA B12 dropout -3.2 -2.9 compare
formate McAA B12 dropout -2.5 -3.4 compare
formate McAA biotin dropout -3.3 -4.2 compare
formate McAA biotin dropout -3.3 -4.2 compare
formate McAA biotin dropout -2.6 -4.0 compare
formate McAA folic dropout -2.9 -3.7 compare
formate McAA folic dropout -3.0 -3.8 compare
formate McAA folic dropout -2.3 -2.9 compare
formate McAA lipolic dropout -4.9 -3.4 compare
formate McAA lipolic dropout -2.7 -4.2 compare
formate McAA lipolic dropout -3.1 -3.9 compare
formate McAA nicotinic dropout -4.0 -4.6 compare
formate McAA nicotinic dropout -2.0 -2.8 compare
formate McAA nicotinic dropout -3.7 -4.6 compare
formate McAA p-aminobenzoic dropout -3.6 -4.3 compare
formate McAA p-aminobenzoic dropout -4.2 -4.0 compare
formate McAA p-aminobenzoic dropout -4.1 -3.9 compare
formate McAA pantothenate dropout -3.3 -3.8 compare
formate McAA pantothenate dropout -3.2 -3.6 compare
formate McAA pantothenate dropout -4.9 -3.4 compare
formate McAA pyroxidine HCl dropout -4.4 -4.2 compare
formate McAA pyroxidine HCl dropout -2.9 -3.9 compare
formate McAA pyroxidine HCl dropout -3.8 -4.4 compare
formate McAA riboflavin dropout -2.9 -3.5 compare
formate McAA riboflavin dropout -3.5 -4.5 compare
formate McAA riboflavin dropout -3.2 -4.3 compare
formate McAA thiamine dropout -3.1 -3.8 compare
formate McAA thiamine dropout -3.9 -4.3 compare
formate McAA thiamine dropout -3.4 -3.7 compare
formate vitamin complete -4.9 -3.3 compare
formate vitamin complete -3.6 -4.2 compare
formate vitamin complete -2.7 -4.1 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.3 -3.0 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.2 -3.5 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -3.2 -3.7 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -1.8 -3.1 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -4.2 -2.8 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.4 -3.4 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -2.6 -3.4 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.0 -3.6 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.1 -3.8 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -2.8 -3.3 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -2.6 -2.9 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.0 -4.4 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.3 -3.9 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -3.1 -3.8 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -3.1 -4.2 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -2.9 -3.5 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -3.8 -3.6 compare
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -3.0 -1.5 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -3.0 -1.6 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -2.5 -0.9 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -3.4 -2.3 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.2 -1.8 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -3.1 -2.1 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.0 -1.3 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.0 -1.2 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.0 -1.3 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.8 -2.2 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.8 -1.8 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -4.0 -2.8 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.9 -1.6 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.1 -2.1 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -3.1 -2.0 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -3.8 -1.8 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -3.7 -1.9 compare
plankonic Formate pooled triplicate planktonic cells -1.9 -3.1 compare
planktonic H2 pooled triplicate planktonic cells -3.1 -1.3 compare
rich t1 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.1 -3.3 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -4.2 -2.9 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.4 -3.9 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.2 -3.5 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -2.8 -3.9 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -2.8 -3.1 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -4.1 -2.8 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.7 -3.6 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -4.1 -2.8 compare
H2 McCas, 5g/L bicarb, 40 psi H2CO2 -3.8 -3.6 compare
H2 McCas, 5g/L bicarb, 40 psi H2CO2 -3.0 -4.4 compare
H2 McCas, 5g/L bicarb, 40 psi H2CO2 -2.8 -4.1 compare
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.1 -2.1 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.1 -2.1 compare
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.3 -2.1 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.9 -2.4 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -4.1 -2.8 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.7 -2.2 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.9 -2.5 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.9 -2.5 compare
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.9 -2.5 compare
H2 McCas, 5g/L bicarb, 40 psi H2CO2 -3.1 -1.8 compare
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -0.6 -0.3 compare
McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -0.7 -0.2 compare
McCas_formate_complete 3-nitroxypropanol 0.00078125 mM -1.7 -1.2 compare
McCas_formate_complete 3-nitroxypropanol 0.00078125 mM -2.0 -1.3 compare
McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM -0.1 -0.1 compare
McCas_formate_complete Anhydrotetracycline 0.05 mM -1.2 -0.7 compare
McCas_formate_complete Antimycin A 0.01 mM -0.1 -0.1 compare
McCas_formate_complete Chlorpromazine 0.0166666666666667 mM -1.5 -0.5 compare
McCas_formate_complete deta nonoate 0.025 mM -1.4 -1.1 compare
McCas_formate_complete deta nonoate 0.025 mM -1.8 -0.9 compare
McCas_formate_complete Irgasan 0.0125 mM -1.0 -0.4 compare
McCas_formate_complete Irgasan 0.0125 mM -1.0 -0.3 compare
McCas_formate_complete Nitrofurantoin 0.025 mM -1.5 -0.4 compare
McCas_formate_complete Nitrofurantoin 0.025 mM -1.0 -0.4 compare
McCas_formate_complete Novobiocin 0.0125 mM -0.5 -0.4 compare
McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM -1.2 -0.6 compare
McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM -1.0 -0.4 compare
McCas_formate_complete Polymyxin B sulfate 0.05 mM -2.2 -0.8 compare
McCas_formate_complete Polymyxin B sulfate 0.05 mM -1.6 -0.6 compare
McCas_formate_complete Rifampicin 0.25 mM -1.0 -0.6 compare
McCas_formate_complete Rifampicin 0.25 mM -0.7 -0.4 compare
McCas_formate_complete silver chloride 0.125 mM -2.0 -0.7 compare
McCas_formate_complete silver chloride 0.125 mM -0.6 -0.4 compare
McCas_formate_complete sodium bromide 125 mM -0.9 -0.4 compare
McCas_formate_complete Chlorite 0.3125 mM -1.3 -1.3 compare
McCas_formate_complete Chlorite 0.3125 mM -1.8 -1.4 compare
McCas_formate_complete Fluorophosphate 31.25 mM -0.5 -0.3 compare
Formate 50 mM hypophosphite -2.2 -3.9 compare
Formate 50 mM hypophosphite -2.3 -2.9 compare
Formate 50 mM hypophosphite -2.1 -3.4 compare
Formate 100 mM hypophosphite +1.3 +1.5 compare
Formate 100 mM hypophosphite -1.5 -2.1 compare
Formate 100 mM hypophosphite -4.0 -2.8 compare
McCas_formate_complete hypophosphite 62.5 mM -2.3 -0.9 compare
McCas_formate_complete hypophosphite 62.5 mM -1.4 -1.2 compare
McCas_formate_complete sodium nitrite 0.125 mM -2.4 -1.2 compare
McCas_formate_complete sodium nitrite 0.125 mM -1.4 -1.2 compare
McCas_formate_complete sodium nitrite 0.416666666666667 mM -1.0 -0.5 compare
McCas_formate_complete sodium nitrite 0.416666666666667 mM -1.0 -0.3 compare
McCas_formate_complete phosphite 25 mM -0.7 -0.5 compare
McCas_formate_complete phosphite 25 mM -1.6 -0.7 compare
McCas_formate_complete selenate 31.25 mM -2.2 -1.4 compare
McCas_formate_complete selenate 31.25 mM -2.0 -0.9 compare
McCas_formate_complete sulfate 125 mM -0.6 -0.3 compare
McCas_formate_complete Spiramycin 0.1 mM -2.2 -0.9 compare
McCas_formate_complete Spiramycin 0.1 mM -1.2 -1.0 compare
McCas_formate_complete Sulfaquinoxaline 0.1 mM -2.1 -0.9 compare
McCas_formate_complete Sulfaquinoxaline 0.1 mM -0.9 -0.8 compare
McCas_formate_complete Ticarcillin 12.5 mM -1.6 -0.4 compare