Fitness data for HSERO_RS23855 in Herbaspirillum seropedicae SmR1

choline dehydrogenase
SEED: Choline dehydrogenase (EC 1.1.99.1)
KEGG:

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.4 -2.2 compare
carbon source L-Asparagine (C) -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.4 compare
nitrogen source L-Glutamic (N); high aeration -0.4 -2.4 compare
nitrogen source Ammonium chloride (N); high aeration -0.4 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -2.4 compare
carbon source a-Ketoglutaric (C) -0.4 -2.1 compare
plant Control soil assay; outgrowth in LB -0.4 -1.6 compare
stress Cobalt chloride 0.2 mM -0.4 -1.6 compare
carbon source L-Arabinose (C) -0.3 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.5 compare
stress nitrate 200 mM -0.3 -1.4 compare
carbon source D,L-Malic Acid (C) -0.3 -1.8 compare
carbon source D-Mannose (C) -0.3 -1.6 compare
nutrient casaminos -0.3 -1.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.5 compare
carbon source D-Sorbitol (C) +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.8 compare