Fitness data for HSERO_RS23555 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Protein rarD
KEGG: chloramphenicol-sensitive protein RarD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Gluconic Acid (C) -0.9 -2.6 compare
plant Control soil assay; outgrowth in LB -0.7 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.7 compare
carbon source Xylitol (C) -0.5 -2.3 compare
carbon source D-Ribose (C) -0.5 -2.2 compare
carbon source D-Lactate (C) -0.5 -2.2 compare
carbon source L-Fucose (C) -0.5 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.1 compare
carbon source Carbon source D-Glucose 20 mM -0.5 -2.1 compare
stress Cobalt chloride 0.2 mM -0.5 -1.7 compare
carbon source Glycerol (C) -0.4 -1.1 compare
vitamin With vitamins t2 +0.4 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.1 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.5 compare
carbon source D-Xylose (C) +0.5 +1.5 compare
control NoPredeControl +0.6 +1.7 compare