Fitness data for HSERO_RS21420 in Herbaspirillum seropedicae SmR1

5-formyltetrahydrofolate cyclo-ligase
SEED: 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)
KEGG: 5-formyltetrahydrofolate cyclo-ligase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
carbon source m-Inositol (C) -4.1 -5.0 compare
carbon source m-Inositol (C) -3.7 -5.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -2.6 -3.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -2.3 -4.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -2.0 -4.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -2.0 -2.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.8 -4.4 compare
carbon source D,L-Lactate (C) -1.3 -2.8 compare
carbon source Carbon source Phenylacetic 5 mM -1.1 -2.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.0 -3.3 compare
plant Control soil assay; outgrowth in LB -1.0 -3.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.0 -3.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -2.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.9 -2.4 compare
carbon source D,L-Lactate (C) -0.8 -2.3 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.8 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +1.2 +3.5 compare