Fitness data for HSERO_RS20120 in Herbaspirillum seropedicae SmR1

peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins protein
SEED: FIG01213668: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -2.1 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.3 compare
r2a control R2A control -0.4 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
carbon source m-Inositol (C) -0.3 -1.6 compare
stress A22 0.04 mg/ml -0.3 -1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.3 -1.8 compare
plant Control soil assay; outgrowth in LB +0.3 +1.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.4 +1.6 compare
carbon source Carbon source D-Glucose 20 mM +0.4 +2.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.4 +2.3 compare
carbon source Carbon source Phenylacetic 5 mM +0.5 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.3 compare