Fitness data for HSERO_RS19710 in Herbaspirillum seropedicae SmR1

hydrolase
SEED: N-formylglutamate deformylase (EC 3.5.1.68)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
vitamin No vitamins t2 -0.8 -3.1 compare
vitamin No vitamins t1 -0.8 -2.9 compare
stress Cisplatin 0.003 mg/ml -0.7 -2.2 compare
carbon source D-Ribose (C) -0.6 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -0.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.9 compare
carbon source D-Glucose-6-Phosphate (C) +0.5 +1.3 compare
carbon source D-Galactose (C) +0.5 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +2.0 compare
carbon source D-Gluconic Acid (C) +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.6 compare
carbon source L-Rhamnose (C) +0.5 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.2 compare
stress sodium fluoride 100 mM +0.5 +1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.3 compare
plant Control soil assay; outgrowth in LB +0.6 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.6 compare