Fitness data for HSERO_RS19540 in Herbaspirillum seropedicae SmR1

adenine glycosylase
SEED: A/G-specific adenine glycosylase (EC 3.2.2.-)
KEGG: A/G-specific adenine glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
plant Control soil assay; outgrowth in LB -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.9 compare
stress Cisplatin 0.003 mg/ml -0.7 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.2 compare
carbon source D-Ribose (C) +0.6 +2.2 compare
carbon source Xylitol (C) +0.6 +1.9 compare
carbon source L-Arabinose (C) +0.6 +2.3 compare
carbon source Glycerol (C) +0.7 +2.3 compare
carbon source D-Sorbitol (C) +0.7 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.8 compare
carbon source L-Arabinose (C) +0.7 +1.8 compare
carbon source Xylitol (C) +0.7 +2.1 compare
carbon source L-Rhamnose (C) +0.7 +2.6 compare
carbon source D-Galacturonic Acid (C) +0.8 +2.8 compare
carbon source D-Xylose (C) +0.9 +2.1 compare
carbon source L-Fucose (C) +1.0 +4.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.3 +1.1 compare